Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02400 ATGTCAAGTATTCAAATGTCTCATGTGGATTTGGAACAAGGAAGAATCCTCCACCACCACCACCACCACCATAGCTCAGTGACTGGGAGTGACATTAGTCTATGCTTCTCTGATGCTGATGATGGAGGCTCATGCTACTCCCATTTCTACTCCACAAATGGTGGTGGATCCTACGATGAAGATTGCTGCTCCTATGGTGGAGCCTCAAATGTTGCAGATGGTGATGATGATGATTGTTCAGTTGAGATTGAAATTGAAAGTGGGGTACCTGAGATTAAGGTGCATTTGGCCACAAACAATAAAGTTGAGAGTAGGGATTGCAGGATTTGCCACCTTGGTTTGGAAGGTGATGATGGGAATAATGAATCTGGTGTTCCAATTGAATTGGGTTGTTCTTGTAAAGATGATCTTGCTGCTGCTCACAAGAATTGTGCAGAGGCTTGGTTCAAGATTAAGGGTAATAGGACCTGTGAAATTTGTCATACAATTGCACGGAATGTGTATTCAGCAAGTGAG 516 0.4322 MSSIQMSHVDLEQGRILHHHHHHHSSVTGSDISLCFSDADDGGSCYSHFYSTNGGGSYDEDCCSYGGASNVADGDDDDCSVEIEIESGVPEIKVHLATNNKVESRDCRICHLGLEGDDGNNESGVPIELGCSCKDDLAAAHKNCAEAWFKIKGNRTCEICHTIARNVYSASEDTTEALSDTNNNNISVTVGSAASTTISAPSSSSSETRRFWHGHRFLNFLLACMVFAFV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02400 230 ProSiteProfiles Zinc finger RING-CH-type profile. 99 167 IPR011016 GO:0008270
Arst2g02400 230 Pfam RING-variant domain 107 160 IPR011016 GO:0008270
Arst2g02400 230 PANTHER ZINC FINGER, RING-CH-TYPE 24 230 - -
Arst2g02400 230 SUPERFAMILY RING/U-box 101 164 - -
Arst2g02400 230 SMART ringv_2 106 161 IPR011016 GO:0008270
Arst2g02400 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 172 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02400 Arst-Chr2 77906861 77911245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02400 79 230 C3H Transcription Factor Family AT5G05830 55.263 1.01e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02400 - - gmx:100813946 285.034