Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst2g02316 | ATGGAACAGGATCAGTGTTGGACGATGCAAGCAAAGAAAAAATTTTCTCTAGGATACAATAATAATCTTATCACCACCAACAATAATGATCGTTCTTCCTATGACGAATCGTCATGGGAAGAACAAGCCTTTGCCGAAGACGCGGCCGGTGCCCTTGTTGGCGGATGCATATGGCCGCCAAGATCATATTCTTGCAGCTTTTGTAGGAGAGAGTTTAGGTCAGCTCAGGCTCTTGGTGGCCACATGAATGTTCATAGAAGGGATAGAGCAAGGCTTAAGCAACAACAACCCTCTAGTCCCAACAACAAGAATAGTAATAGTAACAATAATAATGATGAAGTTTTTCAAAGCAATCCTATCACACCTTTGGGATCATCATATAATACCCTATTATACCCCTCTACTACTTCTTCTACTACTACTCTTTGTGGATTAGCTTTTAAAACTAACCCTAATTCTGATCTTGTTATTCCTTCAGCTTCTTCTTCATCACTACCCTCTACTCCTTCTTCTTCCAAGGCTTTATTATTAGCTACTCCTCCATCATTATTTCCACCACTTTGCAATAATTCTTCTTCTATTCTTCTTCACAAGAATTCCCAAGTCTATTGTTCTCATCCATGGTCAAACTTTGGTGGAGATAATCAAAGGTTGTGTTCTAATAATAAGTTCTTCAACCCTGAAGAAGCTGATGTTGAGAAAGTGATCTCACAAGGTAAGGGAAAAAATGACGAAGGAGAAGAAGAAGACGGCGACGACGACGACGATGTGGGTGTGAGCTTGAACTTGGTTGTTTGTAGAAGTCATCATCAATTTGAGGCTAAAGAAGAAGAACATATAAGTTTCAAGAGGAGGAAAACAGAAGCTTCATCAATTCCACCATTTTTACCAAACTCAACAAGCTCAGTTGATAGATATAATCATCATCACATGCATCATCCAAAGATGATTGAATTAAACCCTAGCTCCATTGAAGAGCTAGATCTGGAGTTAAGGCTTGGTAGCTGCAGCTCCGAGGTATAG | 1023 | 0.3978 | MEQDQCWTMQAKKKFSLGYNNNLITTNNNDRSSYDESSWEEQAFAEDAAGALVGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQQPSSPNNKNSNSNNNNDEVFQSNPITPLGSSYNTLLYPSTTSSTTTLCGLAFKTNPNSDLVIPSASSSSLPSTPSSSKALLLATPPSLFPPLCNNSSSILLHKNSQVYCSHPWSNFGGDNQRLCSNNKFFNPEEADVEKVISQGKGKNDEGEEEDGDDDDDVGVSLNLVVCRSHHQFEAKEEEHISFKRRKTEASSIPPFLPNSTSSVDRYNHHHMHHPKMIELNPSSIEELDLELRLGSCSSEV | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst2g02316 | 340 | SUPERFAMILY | beta-beta-alpha zinc fingers | 60 | 89 | IPR036236 | - | |
Arst2g02316 | 340 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 65 | 85 | IPR013087 | - | |
Arst2g02316 | 340 | MobiDBLite | consensus disorder prediction | 233 | 257 | - | - | |
Arst2g02316 | 340 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 63 | 90 | IPR013087 | - | |
Arst2g02316 | 340 | Gene3D | Classic Zinc Finger | 60 | 118 | - | - | |
Arst2g02316 | 340 | SMART | c2h2final6 | 63 | 85 | IPR013087 | - | |
Arst2g02316 | 340 | PANTHER | OS07G0101800 PROTEIN | 33 | 336 | - | - | |
Arst2g02316 | 340 | MobiDBLite | consensus disorder prediction | 79 | 119 | - | - | |
Arst2g02316 | 340 | Pfam | C2H2-type zinc finger | 63 | 87 | - | - | |
Arst2g02316 | 340 | MobiDBLite | consensus disorder prediction | 94 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst2g02316 | Arst-Chr2 | 75620604 | 75622101 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst2g02316 | 31 | 194 | C2H2 Transcription Factor Family | AT2G37740 | 42.012 | 1.45e-27 | 108 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Arst2g02316 | zf-C2H2_6 | 1.5e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst2g02316 | - | - | adu:107475041 | 569.311 |