Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02300 ATGAAAATGGCTTCCAATTCCAAAAAATGGAGTTATTTTTTTCAATTACTGCTTCTCTCTCTCGCACTTTTCTTGCAGATAGTATCTCATAAAATTGAAGCTGGTGGTTCAAAAGTTGAGTACCTTCCTGGTTTTGATGGTCCTCTCCCCTTTCAACTTGAAACTGGGTATGTGGGATTGGGAGATTCAGAAGATGACATGCAAGTTTTCTACTATTTTGTTAAGTCAGAAAATGATCCTAAAAATGACCCTCTTTTGCTTTGGTTAACTGGTGGACCTGGCTGTTCTTCAATTTCAGGCTTTGTCTTCCAAATAGGTCCAGTGCAATTTAAAGTTGAGGAATTTGATGGGAGCTTGCCTAAGCTAATCTACAGGGCATCGTCATGGACAAAGGTAGCTAATGTTATCTTTGTAGATTTACCGATGGGAACAGGGTTCTCTTACGCAAAAGATGTCCTTTCTCAACGAAGTGATTGGAAACTTGTTCATCATGCCCACCAATTTATTAGAAAGTGGCTCACTGAGAATCCAGAATATATTTCCAATGAATTTTACATGGCGAAATGAGAAAGGTCTTCAACCCCACATAAATCTCCAGGGATACATACTAGGAAACCCCGTAACGACAAGGGAAGAAGGAAATGATCATATCCAATATGCTCATGGAATGGCACTTATTTCTGATGAACTCTATTTGTCATTGAAGAGAAATTGTAAAGGAGATTATCTAAATATAAATCCCGAAAATACATTGTGTTTAAGCGACATGGAGTATTACAATAAGTGCCTTGAAAAAATTGACCTCTATTTCATTTTGAATCCATATTGCAACGATGATTGGCTTAAGCAAGACCAAGGGATGCAAACGAGATCTTTGGCTAGAAAGCTTGAGGCCCGTTTCGAAACTCCTCTCATAGTGCCAGATATAGGCTGTGAGAATTTTCTTTTCTTTCTGGTCACTCAATGGGCCAACCACAGAAGCGTACGCAAGGCACTACACATTCGAGAGGGTACTATAGGGGAATGGGTGCGTTGTTATAAAGATGATTATGAATTCAGCATCGGTAACAGTGTTCCCTTCCATGCAAATCTCAGTGCAAAAGGCTACCGTTCTTTAATTTTCAGTGGAGATCATGATGCAGTGGTTCCTTTTTTCTCAACTCAAGCATGGATAAGGTCTCTAAACTATTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACCAGGACTTACTCAAATAAAATGACATTTGCAACTGTAAAGGGTGCAGGACATACAGCTGCTGAATTGAAGCCTAATGAAAGTTATGTCATGTTCACTAGATGGATATCTAATAGGCCTTTGTAA 1369 0.3915 MKMASNSKKWSYFFQLLLLSLALFLQIVSHKIEAGGSKVEYLPGFDGPLPFQLETGYVGLGDSEDDMQVFYYFVKSENDPKNDPLLLWLTGGPGCSSISGFVFQIGPVQFKVEEFDGSLPKLIYRASSWTKVANVIFVDLPMGTGFSYAKDVLSQRSDWKLVHHAHQFIRKWLTENPEYISNEFYMAADSYSGIPAPPLVQEIANGNEKGLQPHINLQGYILGNPVTTREEGNDHIQYAHGMALISDELYLSLKRNCKGDYLNINPENTLCLSDMEYYNKCLEKIDLYFILNPYCNDDWLKQDQGMQTRSLARKLEARFETPLIVPDIGCENFLFFLVTQWANHRSVRKALHIREGTIGEWVRCYKDDYEFSIGNSVPFHANLSAKGYRSLIFSGDHDAVVPFFSTQAWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNKMTFATVKGAGHTAAELKPNESYVMFTRWISNRPL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02300 474 Pfam Serine carboxypeptidase 43 471 IPR001563 GO:0004185|GO:0006508
Arst2g02300 474 FunFam Carboxypeptidase 376 471 - -
Arst2g02300 474 FunFam Serine carboxypeptidase-like 11 33 474 - -
Arst2g02300 474 FunFam Carboxypeptidase 329 473 - -
Arst2g02300 474 SUPERFAMILY alpha/beta-Hydrolases 39 473 IPR029058 -
Arst2g02300 474 Gene3D - 336 474 - -
Arst2g02300 474 Gene3D alpha/beta hydrolase 33 305 IPR029058 -
Arst2g02300 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Arst2g02300 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Arst2g02300 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Arst2g02300 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Arst2g02300 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 458 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02300 Arst-Chr2 74954353 74964473 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02300 30 61 Calmodulin-binding Proteins AT2G22960 62.500 1.35e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02300 K16296 - gmx:100780069 683.33