Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02266 ATGGGCGGTGCATGTGGGTACGGGAACCTATACAGCCAAGGGTACGGCGTGAACACGGCGGCGCTGAGCACAGCTCTGTTCAACAACGGGCTGAGCTGCGGGGCATGCTTCGAGATCAAGTGCGACCAGGACCCGCGGTGGTGCAACCCCGGCAGCCCCTCTATCGTGGTAACCGCCACCAACTTCTGCCCACCGAATTTTGCCCAAGCCAGCGATAACGGCGGTTGGTGTAACCCCCCAAGGGAACACTTCGACCTCGCTATGCCAATGTTCCTCAAGATCGCTCAGTACCGCGCTGGAATTGTACCAGTCAGCTACCGCCGGGTGCCATGCAGGAAGATAGGTGGAATCAGATTCACAATCAACGGTTTCCGTTACTTCAACTTGGTTTTGATCACCAACGTCGCGGGTGCAGGGGATATCGTGCGCGTGAGCATAAAGGGATCCAAAACTGAATGGAACCCCATGAGCCGTAACTGGGGGCAAAATTGGCAATCCAATGCTGATTTAGTGGGCCAGGCCCTCTCCTTTAGGGTTAAAGGCAGTGACAGACGCGCCTCTACCTCATGGAACGTGGCACCATCTAATTGGCAGTTTGGCCAAACCTTCATGGGCAAGAATTTCCGCATCTAA 633 0.5545 MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQDPRWCNPGSPSIVVTATNFCPPNFAQASDNGGWCNPPREHFDLAMPMFLKIAQYRAGIVPVSYRRVPCRKIGGIRFTINGFRYFNLVLITNVAGAGDIVRVSIKGSKTEWNPMSRNWGQNWQSNADLVGQALSFRVKGSDRRASTSWNVAPSNWQFGQTFMGKNFRI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02266 210 SUPERFAMILY PHL pollen allergen 115 204 IPR036749 -
Arst2g02266 210 FunFam Expansin 116 208 - -
Arst2g02266 210 Pfam Lytic transglycolase 19 106 IPR009009 -
Arst2g02266 210 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 126 205 IPR007117 -
Arst2g02266 210 CDD DPBB_EXPA_N 1 111 - -
Arst2g02266 210 Gene3D - 1 112 IPR036908 -
Arst2g02266 210 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 2 116 IPR007112 -
Arst2g02266 210 FunFam Expansin 1 112 - -
Arst2g02266 210 Pfam Expansin C-terminal domain 117 194 IPR007117 -
Arst2g02266 210 PRINTS Expansin/Lol pI family signature 99 115 IPR007118 GO:0005576
Arst2g02266 210 PRINTS Expansin/Lol pI family signature 23 41 IPR007118 GO:0005576
Arst2g02266 210 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Arst2g02266 210 PRINTS Expansin/Lol pI family signature 1 19 IPR007118 GO:0005576
Arst2g02266 210 PRINTS Expansin/Lol pI family signature 153 167 IPR007118 GO:0005576
Arst2g02266 210 SUPERFAMILY Barwin-like endoglucanases 1 134 IPR036908 -
Arst2g02266 210 PRINTS Expansin signature 41 52 IPR002963 GO:0009664
Arst2g02266 210 PRINTS Expansin signature 55 65 IPR002963 GO:0009664
Arst2g02266 210 PRINTS Expansin signature 91 104 IPR002963 GO:0009664
Arst2g02266 210 PRINTS Expansin signature 191 207 IPR002963 GO:0009664
Arst2g02266 210 PRINTS Expansin signature 14 28 IPR002963 GO:0009664
Arst2g02266 210 PRINTS Expansin signature 127 148 IPR002963 GO:0009664
Arst2g02266 210 PRINTS Expansin signature 162 183 IPR002963 GO:0009664
Arst2g02266 210 PRINTS Expansin signature 74 91 IPR002963 GO:0009664
Arst2g02266 210 PRINTS Expansin signature 115 127 IPR002963 GO:0009664
Arst2g02266 210 PANTHER EXPANSIN-A15 1 208 IPR002963 GO:0009664
Arst2g02266 210 Gene3D - 116 208 IPR036749 -
Arst2g02266 210 SMART dpbb_1 19 106 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02266 Arst-Chr2 73828197 73831122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02266 1 210 Expansin Gene Family AT2G39700 86.190 3.75e-138 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02266 - - gmx:100803595 422.165