Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02197 ATGACAAAGATGTATCAATTTCTTGTGCAACGTTCAAGGCCTTTTCTTTCACAAAGATTTTTCTCTCAGTTTTCTTGTGCATCTTCGTCATCATCACCACCTCTCACTAACAACATGTCCACCACTTCTGGTCTCGTCATTCCCTGCAAAGCTGCTGTTGCATGGGAAGCAGGGAAACCACTGGTGATAGAAAAAGTGGAGGTGGCTCCGCCACAGGCCATGGAAGTGAGGATCAAGGTTAAATATACCTCACTCTGCCATACTGATCTCTACTTCTGGGAGGCCAAGGGACAAACTCCATTGTTTCCCCGAATTTTCGGCCATGAGGCTGCTGGAATTGTGGAGAGTGTTGGAGAAGGAGTCACAGACTTGCAGGTTGGGGATCATGTGCTTCCAGTATTCACCGGTGAATGTGGTGAATGCGCATGCAAATCCGAGGAAAGCAACATGTGTGACCTCCTGAGAATAGATACAGAGAGAGGAGTCATGCATAGTGATGGTAAAAGCAGGTTTTCCATTAATGGTACGCCAATAAACCACTTTGTTGGCACGTCCACGTTTAGTGAGTACACTGTGATACATTCTGGATGCTTGGCAAAGCTCAATCCACTGGCACCAATGGATAAAGTATGTGTCCTCAGTTGTGGTATCTCAACAGGATTGGGAGCAACTTTGAATGTAGCAAAACCAAAGAAGGGTTCTACAGTGGCAGTGTTTGGTCTTGGAGCTGTTGGACTTGCTGCTGCTGAGGGTGCCCGAATTGCTGGTGCATCTAGAATTATTGGAATTGATTTGAACCCAAACAGGTTTGAAGAAGCAAAAAAATTTGGAATAACCGATTTTGTGAATCCACAGGACTATGATAGGCCAGTTCAACAGGTGATTGCGGAAATGACCAATGGAGGAGTTGATCGAAGTATAGAGTGCACTGGAAACATTAACGCAATGATATCTGCTTTTGAATGTGTTCATGACGGATGGGGTGTTGCTGTGCTTGTTGGAGTTCCAACTAAGGATGCAGTTTTCATGACCAAGCCCATTAATTTGCTCAACGAAAGAACACTAAAAGGAACTTTCTTTGGAAATTACAAGCCCAGGACCGATCTTCCATCTGTGGTCGATATGTATATGAACAAGAAATTGGAATTGGACAAGTTTATAACCCACAGAGTTCCTTTCTCTGAAATCAACAAGGCATTTGATCTAATGTTGAGAGGGGAGGGACTAAGGTGTATCATTAGTATGGAAGACTAA 1254 0.4394 MTKMYQFLVQRSRPFLSQRFFSQFSCASSSSSPPLTNNMSTTSGLVIPCKAAVAWEAGKPLVIEKVEVAPPQAMEVRIKVKYTSLCHTDLYFWEAKGQTPLFPRIFGHEAAGIVESVGEGVTDLQVGDHVLPVFTGECGECAXCKSEESNMCDLLRIDTERGVMHSDGKSRFSINGTPINHFVGTSTFSEYTVIHSGCLAKLNPLAPMDKVCVLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARIAGASRIIGIDLNPNRFEEAKKFGITDFVNPQDYDRPVQQVIAEMTNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPTKDAVFMTKPINLLNERTLKGTFFGNYKPRTDLPSVVDMYMNKKLELDKFITHRVPFSEINKAFDLMLRGEGLRCIISMED 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02197 418 FunFam alcohol dehydrogenase 1-like isoform X1 57 220 - -
Arst2g02197 418 FunFam Alcohol dehydrogenase class-P 221 359 - -
Arst2g02197 418 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 207 381 IPR036291 -
Arst2g02197 418 Pfam Alcohol dehydrogenase GroES-like domain 75 199 IPR013154 -
Arst2g02197 418 Pfam Zinc-binding dehydrogenase 244 374 IPR013149 -
Arst2g02197 418 PANTHER ALCOHOL DEHYDROGENASE 46 414 - -
Arst2g02197 418 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 107 121 IPR002328 GO:0008270|GO:0016491
Arst2g02197 418 SUPERFAMILY GroES-like 42 224 IPR011032 -
Arst2g02197 418 CDD alcohol_DH_plants 47 414 - -
Arst2g02197 418 SUPERFAMILY GroES-like 366 414 IPR011032 -
Arst2g02197 418 Gene3D - 57 408 - -
Arst2g02197 418 Gene3D - 221 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02197 Arst-Chr2 71808476 71813232 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02197 75 172 Monolignol Biosynthesis Gene Families AT4G37970 33.333 6.73e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02197 K18857 - egr:104426870 684.871