LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst2g02148	ATGGATATTCTCATTGCAGTTGCTGCAAAAATAGCTGAGTACACTGTAGCACCTATTGGAAGGCAAGTTGGTTATCTAATTTTCCACAAAGCCAAATTTAAAGAGCTAAGAGACCGTGTCAGTGATCTTGAGGGCAAAAGAGACGAAATCAAGCAACGTGTTGAAGAAGAAAGAAGGAATGGGAAAACAACTTTTGATGTTGTGCAGAATTGGTTGAAGAATGTGAATGATGCCATTGGAGAGGCAACTAAACTTCAAAATGATCCTCGTCGTGCAAAGGCTGGATGTTCTAGATGGTCATTTCCTAATGTGGTGACACGCCATCAACTCAGTAGAAAAGCTACAAAAGTTGCCCAAAAAGTTGTTGAAGTACGGGGAGGAGGGGACTTTTCCCAGGTAGCTTACCGTCCTAAACTTGATGCAGTGTCAGCATTTACTACAAGGAGTAGTCAAAACTTGGAGTCAAGAAAACCAATTATGGAGAATATCATGCATGCTCTAAGAGACCCCAAAGTAAGTATGGTTGGAGTCTACGGGCTTGGTGGTGTTGGTAAGACCACTCTGGTTGAAGAAGTTTATCAAATAGCTAAGGAAAATCAGTTGTTTGATGAGGTGGTTATGGCCACCATATCCAAAACACCAGACATCAAAACCGTTCAAGAGGAGATTGCTGATCAGTTGGGTCTTCGTTTTGAAGAGGTAACTGTAGCTGGTAGAGCACCTCGCCTATACGAGAGAATAAAAAAGGAGAAAACCATCCTTCTCATACTGGATGATATTTGGGAAGCCCTTGACTTGAAGAAAGTAGGCATTCCCTCTGATGGTGAACATAATGGCTGCAAATTATTGATGACTTCTAGAACCTTAGATTTGCTACGACATATGGGAGTCAAAGAACATTTTAGACTAGAAGTTTTAAATGAAGAAGAATCATGGAGCTTGTTCCAATCTGAGGCTAATAATTTAGACAAAGAACCCGACAAGCATCAAATTGCATTCCAGTTGGCAAAAAGGTGTGCAGGATTGCCTATTCTCATAGTTACTATGGCGCGCTCATTGATAGATCAAAACATTCATGCGTGGAAAGATGCTTTGAGCCAATTAGAAAAGGTTGACAATGAAGAGTTGCAGGAGATAACTTATTCAGCTTTGGAGTTAAGTTACAAAAGGCTAAAAGGCAATGAGATGAAAGCTTTTTTCTTGCTCTGTGCAACAAATGGTAAAAATCCTTCTGTCAATGACCTATTCAAATATGGGATGGGTCTAGGTATATTCAACAGCACAAATACAATGGAAGGTGCCAGAAATAGACTACATAACATGATAAGTGCATTAAAGGCATCTTGTTTGTTGTTAGAAGATGACACAATCACAAGGGTCAAAATGCATGACGTTGTTCGTGAAGTAGCTATCTCCATCGCTTATAGGGATTATCACATATTAGCCAAGTACGGAGACGGAGATAAGTTGAGGGAATTTCCCAATATGGATATTCTTAGCAACTGCTCCCAGATCATTCTGCAGAATTGTGGTTTTCGCCAGCTTCCTGAAAAGTTAGATGGTCATAATCTAAAATTGTTCCACTTGAGTAACTTTGTGGATCAATGTGTTCTGGAAAATATTGATGCAGTAGGAGCTTTAAAAAATTTAGAAATACTGAGTCTCTTACAGTCATCGATGATAAAACTTTCAAGCGAAATAGGGAAATTGAGTCATTTAAGAATGCTCGATTTGGGTGATTCTGGGATTGAAATCATCCCAGCAGGCGTCATATCAAGCTTGATCAAATTGGAGGAGTTATACATGGGCAATACCTCCATTAAGTGGAAGATTGAGAATTTAGACAATCAAGATGAAAATGCCAGCCTTGATGAACTTCGTCAGTTGTCAAGCCTAACAAGTCTAGAGCTACAGATACAAGAGGCATGGATGTTGCCAAGAGACTTGATGTTTGATAAATTAGAAAGGTTCAAAATTGTTATTGGAGACGTTTGGGAATGGGCTGATATTGACGACGTCACATGGAAAACATTGAAGCTCAAGCTTGGCACCAATATTCACTTGGAGCATGGGATCAAAGGATTGATCAGAAGAGCAGAGAATTTGTATTTGGATGAAGTTGAAGGCATTTCGAATGTACTCTACCAATTGAATAGGGATGGATTTCCTCAACTGAAGCACCTCCACATCCAAAATAATGCCTTAATTCAGCACATCATTGATTTTACAGAGAGGTCTCATATTCCAACCCCATTTCCAAACCTGGAAAAACTGGTGATTCAGAATCTCGGTAAGATGGAGAAAATTTGTCATGGGCCACTTGCAGTTGGTTTCTTCTCCAAGCTCCGAGCCATCAAAGTTGAAAAATGTAACAAAGTAAAATATCTTCTCTCTGTATCCATGGTTAAAGGGATGCCTCAGCTTTCAGAGTTGGAAATTTCTCAATGCAATCTTATGGAAAAGGTAGTGTTTGAAGATGATGATGCAAGTGCAATGAATGACGAAACCATTCAGTTTCCATTGCTCCATTCTCTGACTCTACAACATTTGGATGCGCTTGAATGCTTCTATTCTCATCAGCCAACATCTTCTCCAATATCCCTTTTCAATAATCAAGTTGCATTTCCTAATTTGGACACACTCAAGTTGAGCTCGCTCAATTTGAACAAAATTTGGAAGGATAATCGACACTATTTTTGCAAATTAAGAAATTTGATTGTTGAGAATTGTGATGGTCTAAAGTATTTGTTCTCACCTGCCATGGTGGAGAGTTTTTCCAGCCTCATAAAGCTTGAAATAAGTGAATGCCATCTAATGGAAGAGATAATAGCTGTAGAAGAAGATAGTGACAACAATATTGTCACACTAGAAGAGGTTCGATTTTTCAAATTGCAAACAATTATCTTGAAGAATATGAAGAGTTTGAAGAAAATATGGCACAAAGAATTTTCTAAAGTAAAGACTTTACAAGTAAAAAATTGTGAGAAAATTAGAGCAATTTTTTCTTCTTCAATGCAAAAAGTATATAATGATCTTGAGACATTAATGGTTACTAACTGTGCTTCGGTAGAAGAGATATTTCAACTGAGTTCTGATGAAAATTATAGTACAGAACAAACACAGCTGAAAAAAATTACTCTAAAAGAATTGTCGAAGTTAAAACAAATATGGAGCAAGGATCCTGAAAGAGCTCTTAATTTTTACAATCTAGAGGAAATAAATGTAGAGAGCTACATAAACTTGGAATTTGTATTTCCATGTTCAGTAGCCACAAGTTGCTCACATCTTAAAGAACTTATAATTAAATGGTGTGAAAACATGAAGAAAATTATTGCATTCAAGGAAGAACCCATGTTCTTATCTATTTCCTTTGAGTTTAACCATTTAAATACTTTGGTGCTTTGGGACTTGCTTAAACTCAAAGGGTTCTATGCACGAAATTACACATTATCATGTCCATCTTTGAGAAAATTAGATATTACAGGATGTGTGACGTTAAATTTGTACAGAACTCTTTCTACAAGTAGTCATCAAAAGCTTTCAGATGACGAATATATTATTTCAACACAACAACATTTGGTAGCTGAACAGGTAATGCCTAATTTAGAGCACTTGAGAATAGATGAAAAGGATGCTGCCAACATATTGCAAACCCAAAATATAGGTTCCTTCTTCGACAAAATATCATTTCTTGCTCTATCCAATTACAAGACCGAAGGTTCTGCTTTTCCTGATCAGGTTCTGCAGAATATATGCAGTTTGAAACGGCTACATGTTGAGTGGAGTTCCTTTAAGAAGATATTTCATGATAAAAGGCTTACAAATGAAAAAACTTGTACAAAGCTCCAAAGTTTGATACTCTATCAATTACCAAATCTTCAACATATATGCGAAGAAGGACTGCAAATTGACCCAGTTCTCGAGCTTCTTGAAGATTTATTTGTTTATGGATGTTCAACTTTGATAAACATTGTTCCTTCTTCTGTTACCTTTTTCCATTTGACCTATCTTGAGGTAGCAAATTGCAATAGCATGATAAACTTACTTTCTCCTAGTACAGCAAGAAGTCTGGCCAAACTCACCGTAATGAAGGTAAAACAATGTGATTCACTTGAGGAAATATTGTCCAAAGAGAGAGAGGAGATAACAAATGACATTGCATTTTTCTCTTTGCAAACTTTGGAGTTGGATTCTTTACCAAGACTCGGTAGGTTTTGCTCACAAAAGTGCTTCCTAAGATTTCCATTGTTGAGGAAAGTAGTGGTCAGAAAATGTGCTCGCATGAAGTACTTTTCTGAAGGAGACAAGGTGAGCACACCAAAGCTTGGAAAAGTGCTAACAGCAGAGAATAGAAAAGAATTTTATTGGAAGGGTGACTTGAATGACACCATAAAACACATGTTTGAAAATAAGCTGACCGAGTCAAAACCTACTGCTCAAGTCTGA	4446	0.3736	MDILIAVAAKIAEYTVAPIGRQVGYLIFHKAKFKELRDRVSDLEGKRDEIKQRVEEERRNGKTTFDVVQNWLKNVNDAIGEATKLQNDPRRAKAGCSRWSFPNVVTRHQLSRKATKVAQKVVEVRGGGDFSQVAYRPKLDAVSAFTTRSSQNLESRKPIMENIMHALRDPKVSMVGVYGLGGVGKTTLVEEVYQIAKENQLFDEVVMATISKTPDIKTVQEEIADQLGLRFEEVTVAGRAPRLYERIKKEKTILLILDDIWEALDLKKVGIPSDGEHNGCKLLMTSRTLDLLRHMGVKEHFRLEVLNEEESWSLFQSEANNLDKEPDKHQIAFQLAKRCAGLPILIVTMARSLIDQNIHAWKDALSQLEKVDNEELQEITYSALELSYKRLKGNEMKAFFLLCATNGKNPSVNDLFKYGMGLGIFNSTNTMEGARNRLHNMISALKASCLLLEDDTITRVKMHDVVREVAISIAYRDYHILAKYGDGDKLREFPNMDILSNCSQIILQNCGFRQLPEKLDGHNLKLFHLSNFVDQCVLENIDAVGALKNLEILSLLQSSMIKLSSEIGKLSHLRMLDLGDSGIEIIPAGVISSLIKLEELYMGNTSIKWKIENLDNQDENASLDELRQLSSLTSLELQIQEAWMLPRDLMFDKLERFKIVIGDVWEWADIDDVTWKTLKLKLGTNIHLEHGIKGLIRRAENLYLDEVEGISNVLYQLNRDGFPQLKHLHIQNNALIQHIIDFTERSHIPTPFPNLEKLVIQNLGKMEKICHGPLAVGFFSKLRAIKVEKCNKVKYLLSVSMVKGMPQLSELEISQCNLMEKVVFEDDDASAMNDETIQFPLLHSLTLQHLDALECFYSHQPTSSPISLFNNQVAFPNLDTLKLSSLNLNKIWKDNRHYFCKLRNLIVENCDGLKYLFSPAMVESFSSLIKLEISECHLMEEIIAVEEDSDNNIVTLEEVRFFKLQTIILKNMKSLKKIWHKEFSKVKTLQVKNCEKIRAIFSSSMQKVYNDLETLMVTNCASVEEIFQLSSDENYSTEQTQLKKITLKELSKLKQIWSKDPERALNFYNLEEINVESYINLEFVFPCSVATSCSHLKELIIKWCENMKKIIAFKEEPMFLSISFEFNHLNTLVLWDLLKLKGFYARNYTLSCPSLRKLDITGCVTLNLYRTLSTSSHQKLSDDEYIISTQQHLVAEQVMPNLEHLRIDEKDAANILQTQNIGSFFDKISFLALSNYKTEGSAFPDQVLQNICSLKRLHVEWSSFKKIFHDKRLTNEKTCTKLQSLILYQLPNLQHICEEGLQIDPVLELLEDLFVYGCSTLINIVPSSVTFFHLTYLEVANCNSMINLLSPSTARSLAKLTVMKVKQCDSLEEILSKEREEITNDIAFFSLQTLELDSLPRLGRFCSQKCFLRFPLLRKVVVRKCARMKYFSEGDKVSTPKLGKVLTAENRKEFYWKGDLNDTIKHMFENKLTESKPTAQV	1481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst2g02148	1481	Gene3D	Ribonuclease Inhibitor	1167	1441	IPR032675	-
	Arst2g02148	1481	Pfam	NB-ARC domain	160	389	IPR002182	GO:0043531
	Arst2g02148	1481	Gene3D	-	141	303	IPR027417	-
	Arst2g02148	1481	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	151	403	IPR027417	-
	Arst2g02148	1481	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	1194	1442	-	-
	Arst2g02148	1481	SUPERFAMILY	RNI-like	1199	1376	-	-
	Arst2g02148	1481	SUPERFAMILY	L domain-like	455	942	-	-
	Arst2g02148	1481	Gene3D	-	305	392	IPR042197	-
	Arst2g02148	1481	Gene3D	Ribonuclease Inhibitor	852	1164	IPR032675	-
	Arst2g02148	1481	Gene3D	Ribonuclease Inhibitor	485	851	IPR032675	-
	Arst2g02148	1481	FunFam	Probable disease resistance protein At1g61300	138	300	-	-
	Arst2g02148	1481	SMART	AAA_5	171	311	IPR003593	GO:0016887
	Arst2g02148	1481	PRINTS	Disease resistance protein signature	339	353	-	-
	Arst2g02148	1481	PRINTS	Disease resistance protein signature	174	189	-	-
	Arst2g02148	1481	PRINTS	Disease resistance protein signature	247	261	-	-
	Arst2g02148	1481	PRINTS	Disease resistance protein signature	803	819	-	-
	Arst2g02148	1481	Coils	Coil	33	60	-	-
	Arst2g02148	1481	SUPERFAMILY	L domain-like	874	1175	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst2g02148	Arst-Chr2	69768421	69776153	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst2g02148	172	477	WRKY Transcription Factor Family	AT5G45050	24.684	8.07e-07	52.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst2g02148	-		-	adu:107474809	2934.44