Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02100 ATGGGTTTTCTAAGTCATCAAACTCATGCTAATTCCTTCTTGTTTATTACTACTTTGTTCATATTTGTTAGCATCCATTTGTGTTTGAGCTCTATGAATGACACAATCACATCAAACACATCCATTGAAGACAATCACACAATAACCTCAAACAACACTAACTTCAAGCTCGGATTCTTCAGCCCTCCAAACTCAACCAATCGCTACGCTGCAATATGGTACCTCTCTGACTCCTACATCATATGGATAGCAAACAGAGATCAAGCCGTGAAAGATTCTTCAGGGGTTATCAAGATTCACAAGGATGGCAACCTCGTAGTAATGGACGGAAGAAACTATATAGTTTGGTCAACAAACCTCACATTCTCAACTAAATATGTAACCAATATCTCAAGTGCTCAGCTTCAAGATAACGGTAACCTTGTTCTTAGGGATGGTAAAACTGGAGAAACGGTTTGGGACAGTTTCACGCACCCTGCAGATGCAGCCATGCCAAGGATGAAAATCACGGCGAACAAGATCACAGGCAAGAAAATGGAGTATGTTTCTTGGAAATCCCCTACAGATCCTTCTTCTGGAGACTACTCCGTGAGCATGGAGCGGTTGGCCGCTCCGGAACTTTTCTTATGGTACAAGAAAAGTAGGCCGTATTACCGAACCGGTCCGTGGAACGGTCGGACTTTCCTCGGCTCTCCGAGGATGCTAACAGAGTATCTCTATGGGTGGCGTCTGGACCACGATCCAGATGGAACCAATTATCTAACGTATAATTTCGCTGATCCAGATGCATTTGCTATTGTCTGGATTACTTATGATGGAAAACTTAGGATGGCAAAATTCTTGAACCAGAAGAATTACTACACGATTGATATTTTTCCAAAAGACTGTGATTATTACGGCGCTTGTGGGCCTTTCGGAAACTGTGATCCAAATAGCATACCGATTTGTAGCTGTTTCGAAGGGTTTGAGCCAAGGAATGTGCACGAATGGAGTAAGAAAAATTGGTCTAGTGGTTGTGTGAGGAAGAAAGAGGCACAGCTTCAGTGTGATAGGTTGAAGAATTTGAACAATAATAGTCATAATGGAGTTGATGAAGTGCAACAAGATGGGTTTAAGGTGTTTAATAATATGAAAGTGCCGGATTTCGCTGAGAGATCTGATGATGACGTAGACAATTGCAGAACGAGTTGTTTGGCAAATTGTTCTTGTTTGGCTTATGCTTATGATTCTTATATTGGATGCATGTTTTGGATTAGAGACTTGATTGATTTGGAACAATTCTCAATTGGTGGAGTTGATCTCTTCCTTCGTGTCCCTCATTCTCAACTTGGTAATAAGGGAAGAAGAGTAAGCAAGTCATTAATCATTGCCACTATTGCTGGGGTGATTGGAGTAATTGCATTAGCAATTTGTGGATACATTACATGGCAAAAATGGACCGCCAAACAAGCTCGAACTCTGTCTCAAAAAAAGACTACTGTTGGAGAACAAAATCAAATGAAACTCGACGAACTACCGTTGTTCGAATTTGAAAAGCTTGCAACTGCTACAAACAACTTTCATGCTGAAAACATGCTTGGGAAAGGAGGTTTTGGTCCGGTATATAAGGGCCATTTGGAAGATGGACAAGAAATTGCAGTGAAAAGATTGTCCAAAGCGTCTGGACAAGGGCTGGAAGAATTTATGAATGAAGTAGTGGTTATTTCGAAACTTCAACATCGCAATCTTGTTAGACTTCTTGGTTGTTGCGTCGAACCTGGCGAACAAATGTTGGTCTATGAGTTCATGCCAAACAAAAGTTTGGACGCCTTTCTCTTTGATCCACAACGAAGAAAAGTCTTAGATTGGAAAAAACGTTTCAACATAATTGAAGGGATAGCTCGTGGTATACTTTATCTTCACAGAGATTCAAGACTTAGAATCATACACAGAGATCTCAAAGCAAGCAATATCTTGTTGGATGATGCAATGAATCCAAAAATATCAGATTTTGGTTTAGCTAGAATTTTTAGAGGAGATGAAGATGACGAAGCTAGTACAAAAAAAGTTATTGGAACATACGGTTACATGCCACCTGAATATGCAATGGAAGGATTATTTTCAGAAAAATCAGATGTCTATAGCTTTGGTGTTTTGTTATTAGAGATTGTCAGTGGACGAAGAAACACCAGCTTTTATAACCATCGGCAATCACTAAGCCTTGTGGGATATGCATGGAAACTATGGAATGAAAATAACATCATATCATTAATAGATCCAGAGATTATGGATCCATGCTTTGAGAAAAGTATTTTGAGGTGCATACACATAGGACTTTTATGTGTGCAAGAATTGACAAAAGAGCGACCAACTATATCCACTGTGGTTTTGATGTTAATAAGTGAGATTACACATCTTCCTCCACCAGGACAAGTTGCATTTGTCCACAAACAAAATCTTTACAGTTCAGAATCCTCTCACAAAAGTCACCCATCCACCAGATCAAACAACAATTTAACTCTTTCTGAAATAGAAGGAAGATAA 2523 0.3956 MGFLSHQTHANSFLFITTLFIFVSIHLCLSSMNDTITSNTSIEDNHTITSNNTNFKLGFFSPPNSTNRYAAIWYLSDSYIIWIANRDQAVKDSSGVIKIHKDGNLVVMDGRNYIVWSTNLTFSTKYVTNISSAQLQDNGNLVLRDGKTGETVWDSFTHPADAAMPRMKITANKITGKKMEYVSWKSPTDPSSGDYSVSMERLAAPELFLWYKKSRPYYRTGPWNGRTFLGSPRMLTEYLYGWRLDHDPDGTNYLTYNFADPDAFAIVWITYDGKLRMAKFLNQKNYYTIDIFPKDCDYYGACGPFGNCDPNSIPICSCFEGFEPRNVHEWSKKNWSSGCVRKKEAQLQCDRLKNLNNNSHNGVDEVQQDGFKVFNNMKVPDFAERSDDDVDNCRTSCLANCSCLAYAYDSYIGCMFWIRDLIDLEQFSIGGVDLFLRVPHSQLGNKGRRVSKSLIIATIAGVIGVIALAICGYITWQKWTAKQARTLSQKKTTVGEQNQMKLDELPLFEFEKLATATNNFHAENMLGKGGFGPVYKGHLEDGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCVEPGEQMLVYEFMPNKSLDAFLFDPQRRKVLDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDAMNPKISDFGLARIFRGDEDDEASTKKVIGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFYNHRQSLSLVGYAWKLWNENNIISLIDPEIMDPCFEKSILRCIHIGLLCVQELTKERPTISTVVLMLISEITHLPPPGQVAFVHKQNLYSSESSHKSHPSTRSNNNLTLSEIEGR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02100 840 SMART blect_4 33 159 IPR001480 -
Arst2g02100 840 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Arst2g02100 840 Pfam Protein tyrosine and serine/threonine kinase 522 789 IPR001245 GO:0004672|GO:0006468
Arst2g02100 840 SMART serkin_6 520 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g02100 840 Pfam S-locus glycoprotein domain 218 325 IPR000858 GO:0048544
Arst2g02100 840 Pfam D-mannose binding lectin 80 185 IPR001480 -
Arst2g02100 840 Gene3D - 28 158 IPR036426 -
Arst2g02100 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 190 IPR036426 -
Arst2g02100 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 156 - -
Arst2g02100 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Arst2g02100 840 ProSiteProfiles Protein kinase domain profile. 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g02100 840 MobiDBLite consensus disorder prediction 816 840 - -
Arst2g02100 840 ProSiteProfiles PAN/Apple domain profile. 366 439 IPR003609 -
Arst2g02100 840 CDD PAN_AP_plant 367 439 - -
Arst2g02100 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 596 800 - -
Arst2g02100 840 CDD STKc_IRAK 526 792 - -
Arst2g02100 840 SMART ntp_6 366 438 IPR003609 -
Arst2g02100 840 Gene3D Phosphorylase Kinase; domain 1 494 595 - -
Arst2g02100 840 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 783 - -
Arst2g02100 840 Gene3D Transferase(Phosphotransferase) domain 1 596 798 - -
Arst2g02100 840 CDD B_lectin 41 159 IPR001480 -
Arst2g02100 840 PIRSF SRK 5 840 IPR024171 GO:0004674
Arst2g02100 840 Pfam PAN-like domain 367 424 IPR003609 -
Arst2g02100 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 483 595 - -
Arst2g02100 840 SUPERFAMILY Protein kinase-like (PK-like) 505 812 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02100 Arst-Chr2 68353957 68359704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02100 451 807 Receptor kinase-like Gene Family AT4G23230 53.501 2.88e-123 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst2g02100 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02100 - - ccaj:109790907 1159.44