Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02040 ATGGATTCGAATTCGCTTCAAGGCTATCAACTTGAACAACAACAAAGCAGTAGTTCTGGTTTGCTTCGTTATCGCTCTGCACCGAGTTCGCTTCTCGCGAATCTCACTCCAACTTTCACTGAATCCCAAACCTTGCTCTCGAGATTCGCCAATAGTAATAGCAGTAGCAGCAAGAACAATATTTCCAAAACCGATACCGTTTCGCATAGCTTCCAAGAATTCCCAGATACAAACACAAACACAAAACCAACCAATAAGGGTTGTGATTCGAAGGGTCTGAGGCGGATGAATTCTGGAGGGCACGGATATGGTGGTGGTGGATTGCCACCTCACTACCCAAGGAACACTTCTTCTTCTTCTTGTTCATCTTCAATGGATGGGTTTTTAGGGTTGGTTATGGGTTCAATGGGAATGGACCAAAAAGGGTTTGGCGTTTCTTCTTCTTTAAATCTTCTCAGGCAGAATAGTTCCCCTGCTGACCTTTTCTCCAACGTTTCATTTCAAAATGGATTTGCTACCATGAAAGGTGTCGGGAACTATGGTCATGTTAACAGCACCAGCGAAGAACTTAGTCCATCGATGAACAGATTGAAGAATCAGATTAGCTTCTCATCAAGAACTGCTTCTTCCTTGGGAATGTTGTCGCAGATCTCCGAAATAGGGAGCGAGGAAATTGGGGCAAATAGCCCTGACGATGGGAGGCAGGGTGGTAGCAATGGTGATGCCTTGCATTACAGCCCCGGATTCTCCTATGGTTCTTGGAATGATGCACCACAACAGTCTGAAAACCTCACTGGCTTGAAAAGAGGGCGAAGTAGCAATGGAAAGTTGTTTCCTGATGTTCAGAATGGAGAGCTAGGAAATCAAGTTCATATGCTATCACATCACTTGAGTTTGCCGAAAACTTCATCAGAGATGATTGGTATGGAGAATCTGCTTCAGTTCCCAGATTCTGTTCCTTGTAAAATCAGAGCGAAGCGAGGCTGCGCTACTCATCCCCGAAGCATAGCTGAAAGGGTACGAAGAACACGGATCAGTGAACGAATGAGGAAATTGCAAGAGCTGGTCCCAAACATGGACAAGCAAACCAACACAGCAGACATGTTGGACTTGGCGGTTGACTACATTAAAGATCTTCAGAAACAATTCAAGAATCTAAGTGAAAAGAGGGCAAACTGCAAATGTATAAGCATGCGGAGAGCAGATACAAATCAAATTGTTTAA 1224 0.4428 MDSNSLQGYQLEQQQSSSSGLLRYRSAPSSLLANLTPTFTESQTLLSRFANSNSSSSKNNISKTDTVSHSFQEFPDTNTNTKPTNKGCDSKGLRRMNSGGHGYGGGGLPPHYPRNTSSSSCSSSMDGFLGLVMGSMGMDQKGFGVSSSLNLLRQNSSPADLFSNVSFQNGFATMKGVGNYGHVNSTSEELSPSMNRLKNQISFSSRTASSLGMLSQISEIGSEEIGANSPDDGRQGGSNGDALHYSPGFSYGSWNDAPQQSENLTGLKRGRSSNGKLFPDVQNGELGNQVHMLSHHLSLPKTSSEMIGMENLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQFKNLSEKRANCKCISMRRADTNQIV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02040 407 Coils Coil 369 396 - -
Arst2g02040 407 FunFam Transcription factor bHLH130 family 330 399 - -
Arst2g02040 407 SMART finulus 335 385 IPR011598 GO:0046983
Arst2g02040 407 MobiDBLite consensus disorder prediction 251 283 - -
Arst2g02040 407 Pfam Helix-loop-helix DNA-binding domain 334 380 IPR011598 GO:0046983
Arst2g02040 407 MobiDBLite consensus disorder prediction 252 270 - -
Arst2g02040 407 Gene3D - 330 400 IPR036638 GO:0046983
Arst2g02040 407 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 27 397 - -
Arst2g02040 407 MobiDBLite consensus disorder prediction 1 21 - -
Arst2g02040 407 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 393 IPR036638 GO:0046983
Arst2g02040 407 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 379 IPR011598 GO:0046983
Arst2g02040 407 MobiDBLite consensus disorder prediction 50 87 - -
Arst2g02040 407 MobiDBLite consensus disorder prediction 50 119 - -
Arst2g02040 407 MobiDBLite consensus disorder prediction 223 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02040 Arst-Chr2 66511583 66514727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02040 1 384 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 47.959 1.46e-89 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst2g02040 HLH 4.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02040 - - aip:107625483 716.072