Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g02023 ATGGAGCACGCCGCACTAGACTCCATCCAATTCAACGAGCAAATCCAGGGGCTAATGGCTCCGGCGCCGGAATCCACCAACTCCTTCACGGCGCTCCTCGAGCTACCTCCGCCGCAGGCCGTCAAGCTACTCCACTCGCCGGATAAGGCTCCCACCGGTTCCGAAAAACCGCCCTGCCACGCCAGCATCCTGAAACCCTACCCCTCCATCATGAGCATCATCGACGGAACCCGCAAGCTCACGTTCCCTTCCAACACCGCCCTAATCGAGCGCGCTGCGAGGTTCTCCGTGTTCGCCGGAGAGGGACCGCTGGCTCCACCGGTGGCGGAGGTAAAAAACGAGCCGCCGGAAACCGATTCCAACCCGAGCTCGACTCAGTGCGATCCTGCGGTTGAGAACAAGGGCGCGAAGAGGAAGGAGCGAGAGAAGAAGGTTAAGGCGAGGTCGAAGAAGAGCAAGAGTGTCGCTGCCGCCGAAAGTTCCGGCGACGGCGAGAAGCTTCCGTACGTTCACGTTCGCGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTAGCAGAGAGGGCAAGGAGAGAGAAGATAAATGCTCGGATGAAACTTTTGCAAGAGCTGGTCCCCGGTTGCAACAAGATATCAGGCACAGCATTGGTTCTGGATGAAATCATCAACCATGTCCAATCTCTACAGCGACAAGTGGAGTTTTTATCAATGAAACTAGCAGCAGTTAACCCAAGAATTCATTTCAACCTTGACAGCATAATGCCTAATGAAGGGGCATCTCTAATGGACAGTAGCATTCCTAACATGGTTTCACCCCTCATGTGGCCGGAAATCCCAAACAATGGAAATAGAGAACAATATCAGCAACCATGGCAATTTGATGCATTCCAGCAACCAGTTTGGGGAAGGGAAGAAGAAAACACCAATTTCATGACTCCCGAAAACTCAATGTTGAGTTATGATTCATCAGCTAATTCAGTACCTCTGCAATCGAATCAGTTGAAGATGGAGCTCTGA 1017 0.5261 MEHAALDSIQFNEQIQGLMAPAPESTNSFTALLELPPPQAVKLLHSPDKAPTGSEKPPCHASILKPYPSIMSIIDGTRKLTFPSNTALIERAARFSVFAGEGPLAPPVAEVKNEPPETDSNPSSTQCDPAVENKGAKRKEREKKVKARSKKSKSVAAAESSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIHFNLDSIMPNEGASLMDSSIPNMVSPLMWPEIPNNGNREQYQQPWQFDAFQQPVWGREEENTNFMTPENSMLSYDSSANSVPLQSNQLKMEL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g02023 338 MobiDBLite consensus disorder prediction 106 162 - -
Arst2g02023 338 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 96 322 IPR024097 GO:0006355
Arst2g02023 338 MobiDBLite consensus disorder prediction 116 130 - -
Arst2g02023 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 248 IPR036638 GO:0046983
Arst2g02023 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
Arst2g02023 338 Gene3D - 175 249 IPR036638 GO:0046983
Arst2g02023 338 Pfam Helix-loop-helix DNA-binding domain 182 229 IPR011598 GO:0046983
Arst2g02023 338 Coils Coil 218 238 - -
Arst2g02023 338 CDD bHLH_AtBPE_like 168 253 - -
Arst2g02023 338 SMART finulus 184 234 IPR011598 GO:0046983
Arst2g02023 338 FunFam transcription factor bHLH48-like isoform X1 175 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g02023 Arst-Chr2 65718721 65724726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g02023 5 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 50.532 1.03e-91 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst2g02023 HLH 1.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g02023 - - vun:114168708 431.795