Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01962 ATGGAGAAGATTTCACTAACAACAACTGCTCATAACTGTTTCTTCACTTCTACACTTCCAAAGACATCTTCTTTCTCTTCTTCTCTATTCGCCTCTAACCAGCTTCTTGGTCTTCCCTTATCTTCTTCTTCTTCTTCTTCTGCGTCCACCAATCCCCGCCTCAGACTTGTTTCTAGAAACGCCGCTTCTTGCAGAACCGTCAAATGCTCTGTTTCTGAAGCCGCTGAACCCCTAACTGCTTCAGAGAGGAGGCAATTGAAGAGAAGAGGGGATGTAAGGAACATAGCAATTGTTGCTCATGTTGATCATGGAAAAACAACTCTAGTTGATGCCATGTTGAAACAGACAAAGGTGTTTCGTGATAATCAATTTGTGCAGGAAAGGATAATGGACTCAAATGATTTGGAGCGTGAGAGAGGAATCACAATATTGAGTAAAAATACATCGGTCTCCTATCATGACACAAAGATTAATATAATAGATACTCCTGGTCACTCTGATTTTGGAGGTGAAGTAGAGCGTATCCTGAACATGGTGGAAGGAATCCTTCTAGTGGTAGATTCTGTTGAAGGACCAATGCCACAGACAAGATTTGTCTTAAAGAAAGCATTAGAGTTTGGTCATTCAGTTGTTGTGGTTGTTAATAAGATAGACAGGCCATCTGCTCGCCCAGATTTTGTTGTCAATTCAACTTTTGAACTCTTCATTGAATTAAATGCAACAGATGAGCAGTGCGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGACAAGCAGGGTTGTCTCCTGAGAATCTGGCAGAAGACCTTGGGCCATTGTTTGAGTCCATCATCAGATGCATCCCAGGACCAAGGATTGATAAAGATGGTGCTCTTCAAATGCTTGTCACAAATATTGAGTATGATGAACACAAAGGGCGTATAGCAATTGGGCGCTTGCAAGCTGGAGTTTTGGAAAAAGGCATGGATGTCAAGGTATGCACATCAGAAGATTCATGTAGATATGGAAGAGTTAGTGAGCTTTACGTGTATGATAAATTCAGTAGGGTCCCTGCAGAAAGTGTGGAGGCTGGTGATATATGTGCAGTATGCGGAATTAGTGATATTCAGATTGGAGAGACAATTGCTTGTAAAGTGTCTGGAAAGCCACTACCTTCCATAAAGGTGGAGGAACCAACCGTGAAAATGGCTTTCTCCATAAACACTTCCCCTTTTGTTGGCCGCGAGGGAAAGTATGTTACGAGTAGGAACTTAAGGGACAGGCTTTATCGTGAACTTGAGCGAAACCTCGCCATGAAAGTTGAAGATGGTGAGACAGCAGATACATTCATTGTCAGTGGGCGTGGAACTTTGCATATCACCATACTGATTGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGCCCTCCTAAAGTTATCAACAAGAAAGTTAACGACAAATTGCTAGAACCATATGAGATTGCAACTGTTGAGGTACCTGAAGAACATATGGGAGCTGTTGTTGAACTCCTTGGGAAGAGACGAGGGCAGATGTTTGATATGGAAGGAGTTGGATCGGAGGGAACTACATTACTCAAATACAAGATCCCAACTCGTGGCCTCCTTGGATTACGGAATGCAATTTTAACTGCTTCCCGAGGGACAGCTATTCTCAATACTATCTTTGATAGCTATGGACCCTGGGCTGGTGACATGAGTACCCGGGATCAAGGCTCACTGGTTGCTTTTGAGGATGGAACAAGTTCTTCTTATGCAATCGCTAGTTCACAGGAAAGGGGACAGATGTTTATCGGTCCTGGAGTGGATGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCATTGAATGTTTGCAAGAAAAAAGCTGCAACAAACATACGCTCCAACAAGGAACAAACAGTGATTCTTGATACACCCTTGGATTATAGTCTTGATGACTGCATCGAGTACATACAAGAAGATGAACTAGTAGAGGTTACTCCCCAAAGTATTCGAATGTGCAAGAATCCAAAGCTTCAGAAGAAAACAAGGTAG 2055 0.4229 MEKISLTTTAHNCFFTSTLPKTSSFSSSLFASNQLLGLPLSSSSSSSASTNPRLRLVSRNAASCRTVKCSVSEAAEPLTASERRQLKRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVSYHDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRLQAGVLEKGMDVKVCTSEDSCRYGRVSELYVYDKFSRVPAESVEAGDICAVCGISDIQIGETIACKVSGKPLPSIKVEEPTVKMAFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNDKLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDMSTRDQGSLVAFEDGTSSSYAIASSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLQKKTR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01962 684 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 131 146 IPR031157 -
Arst2g01962 684 FunFam GTP-binding protein TypA 570 656 - -
Arst2g01962 684 NCBIfam translational GTPase TypA/BipA 92 681 IPR006298 GO:0003924|GO:0005525
Arst2g01962 684 SMART EFG_C_a 482 571 IPR000640 -
Arst2g01962 684 Pfam Elongation factor Tu domain 2 306 375 IPR004161 GO:0005525
Arst2g01962 684 SUPERFAMILY Translation proteins 238 378 IPR009000 -
Arst2g01962 684 SUPERFAMILY EF-G C-terminal domain-like 485 600 IPR035647 -
Arst2g01962 684 CDD BipA_TypA_C 485 564 IPR035651 -
Arst2g01962 684 FunFam GTP-binding protein TypA 286 386 - -
Arst2g01962 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 292 IPR027417 -
Arst2g01962 684 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 90 285 IPR000795 GO:0003924|GO:0005525
Arst2g01962 684 Pfam Elongation factor G C-terminus 483 567 IPR000640 -
Arst2g01962 684 PRINTS GTP-binding elongation factor signature 138 146 IPR000795 GO:0003924|GO:0005525
Arst2g01962 684 PRINTS GTP-binding elongation factor signature 158 168 IPR000795 GO:0003924|GO:0005525
Arst2g01962 684 PRINTS GTP-binding elongation factor signature 210 219 IPR000795 GO:0003924|GO:0005525
Arst2g01962 684 PRINTS GTP-binding elongation factor signature 94 107 IPR000795 GO:0003924|GO:0005525
Arst2g01962 684 NCBIfam small GTP-binding protein domain 93 241 IPR005225 GO:0005525
Arst2g01962 684 CDD TypA_BipA 91 284 IPR047041 -
Arst2g01962 684 CDD BipA_III 392 470 IPR047043 -
Arst2g01962 684 CDD BipA_TypA_II 292 385 IPR047042 -
Arst2g01962 684 Gene3D - 90 285 IPR027417 -
Arst2g01962 684 Gene3D Translation factors 286 386 - -
Arst2g01962 684 Gene3D Elongation Factor G (Translational Gtpase), domain 3 393 676 - -
Arst2g01962 684 FunFam GTP-binding protein TypA 89 285 - -
Arst2g01962 684 Pfam Elongation factor Tu GTP binding domain 92 282 IPR000795 GO:0003924|GO:0005525
Arst2g01962 684 SUPERFAMILY EF-G C-terminal domain-like 390 474 IPR035647 -
Arst2g01962 684 FunFam GTP-binding protein TypA 476 569 - -
Arst2g01962 684 Gene3D - 476 569 - -
Arst2g01962 684 FunFam GTP-binding protein TypA 393 498 - -
Arst2g01962 684 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 564 680 - -
Arst2g01962 684 Gene3D bipa protein 570 677 IPR042116 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01962 Arst-Chr2 62930200 62938410 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01962 92 219 Eukaryotic Initiation Factors Gene Family AT3G22980 43.846 3.23e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01962 K06207 - gmx:100785222 1162.13