Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01957 ATGGCAGCACAAAATTCGGATGCATGTCCTTCTAGATCCTCTAGCATCTCTGAAGGGAGTGGTAATAACACCAACAATTCGAGGGACAATGATTTGGCAACCGAACTGGTGGATCAAGCCTCCAATTCGAGAACGATGTTGGCATTTGTAAAGCTCTCGAATGATGATTCATCGCTTCGTTGTTCTTCGAAAGTGCAGGAGCTCGATTTTTTCAACCCGGGAAAGAGGGTGACGAAAGAATCCTCGCCTTCTTTGGCTAACAACATTGATGAAGGAAAGAATAAAAACACCGAGGAGAAGACTACTTCAGAGTCTAGAACCTTCTCTTGTAACTTCTGCAACAGAAATTTCTCGTCTTCGCAAGCCCTAGGAGGGCACCAAAATGCACACAAACAGGAGCGCGCCATAGCGAAACGTCGCCAAGCAATCGACGCAACTGGCTTTGGTCACCCTCACTTTCCTTATTATTCTACTTACCCTAGCCTGACCTCTCACCCTTTATATAATAGGGCACTTGGGGTAAGGATCGACTCCATGATTCACAAACCTAATTCTTATCCTTGGTCTCGCCTTAGGTTCGATCATAATAACCATAATTGGTCACGGTCAGGGATGCTTGAGGGATTGCAACTAAATGGGGGAGGTTCTTCAAATTTGAATTTGTTTAGAGAAGATGATAACGGCGGTAGTAGAACTATTCCCCTATTCGGAGTTTCTTCTACAGATGTTGCTTCTACTTCTAATGCAGCCATCAATAACAACCCAACAATAAGGATTGATGATACTCATGATCAGAATCCAAAGCCAGATGAACCTTCCACTACTATGTCTCCAAGCCTTGATTTGTCGCTTAAGCTTTAA 861 0.4379 MAAQNSDACPSRSSSISEGSGNNTNNSRDNDLATELVDQASNSRTMLAFVKLSNDDSSLRCSSKVQELDFFNPGKRVTKESSPSLANNIDEGKNKNTEEKTTSESRTFSCNFCNRNFSSSQALGGHQNAHKQERAIAKRRQAIDATGFGHPHFPYYSTYPSLTSHPLYNRALGVRIDSMIHKPNSYPWSRLRFDHNNHNWSRSGMLEGLQLNGGGSSNLNLFREDDNGGSRTIPLFGVSSTDVASTSNAAINNNPTIRIDDTHDQNPKPDEPSTTMSPSLDLSLKL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01957 286 Gene3D Classic Zinc Finger 87 147 - -
Arst2g01957 286 MobiDBLite consensus disorder prediction 74 103 - -
Arst2g01957 286 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Arst2g01957 286 MobiDBLite consensus disorder prediction 246 260 - -
Arst2g01957 286 MobiDBLite consensus disorder prediction 269 286 - -
Arst2g01957 286 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
Arst2g01957 286 MobiDBLite consensus disorder prediction 1 32 - -
Arst2g01957 286 MobiDBLite consensus disorder prediction 77 91 - -
Arst2g01957 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Arst2g01957 286 MobiDBLite consensus disorder prediction 246 286 - -
Arst2g01957 286 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 286 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01957 Arst-Chr2 62657103 62657963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01957 85 194 C2H2 Transcription Factor Family AT5G25160 45.161 2.95e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst2g01957 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01957 - - adu:107474629 546.199