Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01897 ATGTCTCTTGAAGAGTCTCTAAGATCTCTCTCCCTTGACTACCTCAACCTGCTCATCAACGGCCAAGCCTTCAGCGACGTCACTTTCCAAGTCGAAGGCCGACTCGTCCACGCCCACCGCTGCATCCTCGCAGCACGCAGCCTATTCTTCAGGAAATTCTTTTGCGGCCCGGACCCTCCGTGCGGCCTTGACCCGGTGGGCGCTTCCAGGGGAAGCCCGGGCCCGACCACAACGGGCTCTTCGAGGGCCCCGGCGGGGGTGATCCCGGTGAACTCTGTCGGTTACGAGGTGTTCTTGCTGCTTCTTCAGTTCCTTTACAGCGGCCAGGTGTCCATCGTGCCTCAGAAGCACGAGGCCCGGCCCAATTGCGGTGAGAGGGGTTGCTGGCACACGCATTGCACCTCAGCCGTTGATCTCGCCCTCGACACTCTCGCTGCCGCTAGATACTTTGGCGTTGAACAGCTTGCATTGCTCACTCAGAAACAACTAGCAAGCATGGTAGAGAAAGCGTCAATTGAAGATGTGATGAAGGTACTGTTGGCATCAAGAAAGCAAGAAATGCAGCAGTTATGGACAACGTGCTCCCACCTAGTGGCCAAGTCAGGCCTCCCACCTGAAGTCCTTGCCAAGCACCTCCCAATCGACCTCGTTGCCAAGATCGAAGAGCTCCGCCTCAAATCCTCCCTCTCTCGCCGCTCCCTCATCCCATCTCCGTACCACCACCCTCACCACCACCACCACCATGACCTCACGGTTGTCGGGGACATCGAGGACCAAAAGATTCGCCGGATGCGACGGGCCCTCGATTCCTCTGACGTAGAGCTCGTAAAGCTCATGGTGATGGGCGAGGGTCTCAACCTGGACGAGGCTCTTGCCCTTCACTATGCAGTGGAGAATTGCTCCAGGGAGGTCGTCAAGGCCCTTCTAGAGCTCGGCGCTGCGGACGTCAACTTCCCGGCTGGACCAGCAGGGAAGACGCCGCTCCACGTAGCTGCTGAAATGGTGTCCCCCGACATGGTGGCCGTTCTCCTCGACCACCACGCCGATCCTAACGTGCGTACTGTGGACGGCGTCACCCCTCTGGATATCCTAAGAACCCTAACCTCCGATTTCCTCTTCAAAGGTGCGGTTCCTGGTCTCACACACATTGAACCCAACAAGCTAAGGCTGTGTTTGGAGCTCGTTCAATCAGCGGCACTCGTTCTTTCGCGAGAAGAAGGGAATGCAAACCCTCCTTCTTCAGCAACAGCAATATATCCTCCTCCACTTAGCACCGATCATCAGGACCATAGTGGGAACTTGGATTCGAGATTGGTGTACCTTAACCTTGGTGCTTCCGGTTCCGGACAAATGGGTAGTGGTGGTGGTGACGAAGATAGTAGCAGCCACAGTAGCCATAGCCAAAGAGAAGCCATGAACCGTCATGGGTCGCAAGGTGGTGGATGTGACCCAACAATGTACCACCATCATCACTCTCATCATGACTACTAA 1491 0.5627 MSLEESLRSLSLDYLNLLINGQAFSDVTFQVEGRLVHAHRCILAARSLFFRKFFCGPDPPCGLDPVGASRGSPGPTTTGSSRAPAGVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEARPNCGERGCWHTHCTSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLLASRKQEMQQLWTTCSHLVAKSGLPPEVLAKHLPIDLVAKIEELRLKSSLSRRSLIPSPYHHPHHHHHHDLTVVGDIEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNFPAGPAGKTPLHVAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNANPPSSATAIYPPPLSTDHQDHSGNLDSRLVYLNLGASGSGQMGSGGGDEDSSSHSSHSQREAMNRHGSQGGGCDPTMYHHHHSHHDY 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01897 496 Gene3D - 255 371 IPR036770 -
Arst2g01897 496 Pfam Domain of unknown function (DUF3420) 202 265 IPR024228 -
Arst2g01897 496 SUPERFAMILY POZ domain 9 165 IPR011333 -
Arst2g01897 496 ProSiteProfiles Ankyrin repeat region circular profile. 323 353 - -
Arst2g01897 496 ProSiteProfiles Ankyrin repeat profile. 323 355 IPR002110 GO:0005515
Arst2g01897 496 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 491 IPR044284 GO:0099402
Arst2g01897 496 Pfam BTB/POZ domain 16 116 IPR000210 GO:0005515
Arst2g01897 496 SMART ANK_2a 323 352 IPR002110 GO:0005515
Arst2g01897 496 SMART ANK_2a 288 318 IPR002110 GO:0005515
Arst2g01897 496 MobiDBLite consensus disorder prediction 446 461 - -
Arst2g01897 496 MobiDBLite consensus disorder prediction 405 432 - -
Arst2g01897 496 SUPERFAMILY Ankyrin repeat 282 366 IPR036770 -
Arst2g01897 496 FunFam regulatory protein NPR5 isoform X1 4 200 - -
Arst2g01897 496 FunFam regulatory protein NPR5 isoform X2 254 371 - -
Arst2g01897 496 Pfam Ankyrin repeats (3 copies) 271 353 IPR002110 GO:0005515
Arst2g01897 496 ProSiteProfiles BTB domain profile. 25 114 IPR000210 GO:0005515
Arst2g01897 496 Gene3D Potassium Channel Kv1.1; Chain A 3 200 IPR011333 -
Arst2g01897 496 MobiDBLite consensus disorder prediction 445 496 - -
Arst2g01897 496 SMART BTB_4 25 167 IPR000210 GO:0005515
Arst2g01897 496 CDD BTB_POZ_NPR_plant 8 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01897 Arst-Chr2 59273658 59279378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01897 258 377 C2H2 Transcription Factor Family AT5G12850 30.216 7.58e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst2g01897 BTB 1.3e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01897 K14508 - zju:107433767 730.709