Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01873 ATGGACCAGGTATTCACATTCGTTCTCCGCAAATCCGGCGCCGAGTGGACTGTGAAGCAGCACTCCGGCGACATCGAGGACTCCGCCTCCTCCACCTACGACCTTCAACGCAAGCTCGTCAATGCCGCTCGCGCCGCTGATTCCTCCGGCGCCGTTCAGTCCTCTTTCTCTTTCGTTTCTCCCTCCTCTGCTGTCTTCCAGGTGGTTGTGGGTGGTGCAGTCTTCGTTGGAGGTGGTGCTGTTACTGCTGCTCCTGCTGGTGGTGCTGCCGCAGAGAGCGCCGCCGCCCCTGCTGCCGAGAAGAAAGAAAAGAAGGTCGAGAAAGAGGAAGACGAAGATTTTGGAATGTCACTCTTTGATTAA 363 0.5702 MDQVFTFVLRKSGAEWTVKQHSGDIEDSASSTYDLQRKLVNAARAADSSGAVQSSFSFVSPSSAVFQVVVGGAVFVGGGAVTAAPAGGAAAESAAAPAAEKKEKKVEKEEDEDFGMSLFD 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01873 120 Pfam 60s Acidic ribosomal protein 52 119 - -
Arst2g01873 120 MobiDBLite consensus disorder prediction 97 112 - -
Arst2g01873 120 MobiDBLite consensus disorder prediction 87 120 - -
Arst2g01873 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 4 120 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01873 Arst-Chr2 56926322 56927236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01873 4 69 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 71.212 7.67e-28 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01873 K02942 - gmx:100527385 94.7449