Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01813 ATGGAGCCTTTGGAAATTGATCTTGTGGATATTCCTGATACTCCAGATAGATTAACTACCAGGCCTGGTGATCAGAAACATGTTCGGAATCCTGAGAAGAGGGAGAAGGTCTTCCCTGCTGCTGATGAAATGAAGAAACTCAGCAACTATATAATACTTTCCCCATCAAAGGCACCTTATCCTTCTTATAATGGCCCCTTCTTCAGAAAAACTCAAACTGAGAAAACTTTAGGACTTGGGACAGCACACTCTATTGGTGCTGAAAAGATGGAGAGAGGGAAAACTGTAAGCTCTAGATTTCCTGCTAAATCATCTCGCCATGGACCTAGGTCTGTTTTAGATTTTACTGAAGAGAATGAGAACTCCCAACAGCTGAAACCAGCTTTCTCACATCATGGATCAAGAGATAAGGCTGTTGAAGATAAGAAAGTAACAAGCGCTGGAAACACTTCATCACGAGTTGTTGCTGATTCTTCTACTGCCTTCAGAGATAAAATGCTACCAGGTCCTAATATATCTCAGGAGCGTGGCAAGGGAATTGCACTGCCTAATGATTCTCATCCTCCACTAAACACTGAAAAGCAACTGTCTTTGCCCCCTCAAATTTCCACCACACCAAGAGTTAGAGGGCAGAAGAGATTGGTACGAAATGGGTGTATTTCACCATATAATATTGCAAATAGAGCAAATCAAGCAACTATAAAGGATAATCACCAAACCAAGGAAGTTGAAGAAAGTCATGCTGTGGATTTAGTTTCTACCAATCCAATTTCTACGATTAGTGTTGAAGATATAGTTGCTGAAGAGAGAGGCTGTAATAGAGTGAAGGGAAAGCAAGTACTTATTCATCCTTCATCATATGGTCTTAACACTGGAACTGTTCGCATGGCTAGCAGCAACCCTGCGACTGATTTTGAGGAGGGCCATTCAGCCAGTAATGCTGTAAGGAATTCACTTAAAATCTCTGGGGGACAAGATGGTTGGAGAACTACACATGCTCATAACAGCATTGATCAGCATCCTTATGATGTGAATGGGCATAATTTACGCAGAAGCCATGATGTTGGAAGATTTATTGCTAGACAAAATATGAACAGAATGGATAGAAGAGACACTCATAGCAGTCAAAGTGGCAAGGATGCACAAGGTTCTTCATCAGATAATGCAGCTCAAGCAACTTCACTGACAATTCGAGAGATAGATCAGTTGACTGTAACTCATCCTGCCACAGGCACACTGAGTAAAAGGCAAAAGAAACGTGGATCAACATCAGGAAATCCTGGGCAATCATCAAGCTCATCCCATAACCCTGTCTTGAATTCTGAAGTAGTAGACTTATCACCAGAACCCAGTTATACCAACAGATTTACTGAAGGCTTAGATGACAATGACAATGACAAAGCTCGAGCAAGGCAAGTAGAAGCAGATGAGAGATTGGCACGTGAACTCCAAGAACAACTGTATCATGATGATATTTTTGAAGGGAGAGGGATTGATGAACATTTAGCCTTGGCACTGCAGCAAGAGGAGAATCTTATTCGTACTTCTTTTGATAATCACCAAACATCAAATCCTATGTTTCCGAGGGCAAATAGTCAGCCTCGTTCACGGCCACATCAAAATCCTTCTAATAGGAGGAGAGTTCCACCTCAAGTTCCTTCCTCTAATAGAATGTCACAGTTGAGGTCACAGTTGAGGAGTCACATCGCAAATCGTTCCCGAAGACCAGCCATATCATCCAGAGGACGACGCCCCCGGTTTCCTGTGGATATGGACTTAAACATGAGGCTTGATATATTGGAAGCATTAGAGGATGCAGTAGGGGATTTTGCAGATTTAGGGATGGGTAATGACATCTTTCTTGCTCAACATGATTTCAATGAACATGATTATGAAATGTTGTTGGCCCTTGATGAGCAAAACCACCGACATACTGGTGCATCCTCCAATCAGATCAATAGTTTGCCGGAGTCCACCATCCAGAATGACAACTTCGCAGAGGCCTGTGCAATATGCCTTGAGACCCCAGGCAAGGGTGAAATTATTCGCCATCTTCCCTGTTTGCACAAATTTCACAAAGATTGTATTGATCCTTGGCTCCATAGGAAAACATCATGCCCGGTGTGCAAGTCATCTATCACCTAA 2145 0.4247 MEPLEIDLVDIPDTPDRLTTRPGDQKHVRNPEKREKVFPAADEMKKLSNYIILSPSKAPYPSYNGPFFRKTQTEKTLGLGTAHSIGAEKMERGKTVSSRFPAKSSRHGPRSVLDFTEENENSQQLKPAFSHHGSRDKAVEDKKVTSAGNTSSRVVADSSTAFRDKMLPGPNISQERGKGIALPNDSHPPLNTEKQLSLPPQISTTPRVRGQKRLVRNGCISPYNIANRANQATIKDNHQTKEVEESHAVDLVSTNPISTISVEDIVAEERGCNRVKGKQVLIHPSSYGLNTGTVRMASSNPATDFEEGHSASNAVRNSLKISGGQDGWRTTHAHNSIDQHPYDVNGHNLRRSHDVGRFIARQNMNRMDRRDTHSSQSGKDAQGSSSDNAAQATSLTIREIDQLTVTHPATGTLSKRQKKRGSTSGNPGQSSSSSHNPVLNSEVVDLSPEPSYTNRFTEGLDDNDNDKARARQVEADERLARELQEQLYHDDIFEGRGIDEHLALALQQEENLIRTSFDNHQTSNPMFPRANSQPRSRPHQNPSNRRRVPPQVPSSNRMSQLRSQLRSHIANRSRRPAISSRGRRPRFPVDMDLNMRLDILEALEDAVGDFADLGMGNDIFLAQHDFNEHDYEMLLALDEQNHRHTGASSNQINSLPESTIQNDNFAEACAICLETPGKGEIIRHLPCLHKFHKDCIDPWLHRKTSCPVCKSSIT 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01813 714 MobiDBLite consensus disorder prediction 362 466 - -
Arst2g01813 714 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 635 714 IPR013083 -
Arst2g01813 714 MobiDBLite consensus disorder prediction 377 458 - -
Arst2g01813 714 CDD RING-H2_PA-TM-RING 669 710 - -
Arst2g01813 714 MobiDBLite consensus disorder prediction 144 158 - -
Arst2g01813 714 SUPERFAMILY RING/U-box 668 713 - -
Arst2g01813 714 Coils Coil 465 485 - -
Arst2g01813 714 ProSiteProfiles Zinc finger RING-type profile. 669 710 IPR001841 -
Arst2g01813 714 MobiDBLite consensus disorder prediction 324 342 - -
Arst2g01813 714 Pfam Ring finger domain 668 710 IPR001841 -
Arst2g01813 714 FunFam RING/U-box superfamily protein 634 714 - -
Arst2g01813 714 PANTHER SI:CH211-59O9.10 356 714 - -
Arst2g01813 714 MobiDBLite consensus disorder prediction 10 30 - -
Arst2g01813 714 MobiDBLite consensus disorder prediction 82 178 - -
Arst2g01813 714 MobiDBLite consensus disorder prediction 115 129 - -
Arst2g01813 714 SMART ring_2 669 709 IPR001841 -
Arst2g01813 714 MobiDBLite consensus disorder prediction 362 376 - -
Arst2g01813 714 MobiDBLite consensus disorder prediction 518 567 - -
Arst2g01813 714 MobiDBLite consensus disorder prediction 324 349 - -
Arst2g01813 714 MobiDBLite consensus disorder prediction 518 584 - -
Arst2g01813 714 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01813 Arst-Chr2 51934041 51943304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01813 462 714 C3H Transcription Factor Family AT1G04790 50.192 3.33e-67 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01813 - - aprc:113872307 829.706