Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01812 ATGGAGCCTTTGGAAATTGATCTTGTGGATATTCCTGATACTCCAGATAGATTAACTACCAGGCCTGGTGATCAGAAACATGTTCGGAATCCTGAGAAGAGGGAGAAGGTCTTCCCTGCTGCTGATGAAATGAAGAAACTCAGCAACTATATAATACTTTCCCCATCAAAGGCACCTTATCCTTCTTATAATGGCCCCTTCTTCAGAAAAACTCAAACTGAGAAAACTTTAGGACTTGGGACAGCACACTCTATTGGTGCTGAAAAGATGGAGAGAGGGAAAACTGTAAGCTCTAGATTTCCTGCTAAATCATCTCGCCATGGACCTAGGTCTGTTTTAGATTTTACTGAAGAGAATGAGAACTCCCAACAGCTGAAACCAGCTTTCTCACATCATGGATCAAGAGATAAGGCTGTTGAAGATAAGAAAGTAACAAGCGCTGGAAACACTTCATCACGAGTTGTTGCTGATTCTTCTACTGCCTTCAGAGATAAAATGCTACCAGGTCCTAATATATCTCAGGAGCGTGGCAAGGGAATTGCACTGCCTAATGATTCTCATCCTCCACTAAACACTGAAAAGCAACTGTCTTTGCCCCCTCAAATTTCCACCACACCAAGAGTTAGAGGGCAGAAGAGATTGGTACGAAATGGGTGTATTTCACCATATAATATTGCAAATAGAGCAAATCAAGCAACTATAAAGGATAATCACCAAACCAAGGAAGTTGAAGAAAGTCATGCTGTGGATTTAGTTTCTACCAATCCAATTTCTACGATTAGTGTTGAAGATATAGTTGCTGAAGAGAGAGGCTGTAATAGAGTGAAGGGAAAGCAAGTACTTATTCATCCTTCATCATATGGTCTTAACACTGGAACTGTTCGCATGGCTAGCAGCAACCCTGCGACTGATTTTGAGGAGGGCCATTCAGCCAGTAATGCTGTAAGGAATTCACTTAAAATCTCTGGGGGACAAGATGGTTGGAGAACTACACATGCTCATAACAGCATTGATCAGCATCCTTATGATGTGAATGGGCATAATTTACGCAGAAGCCATGATGTTGGAAGATTTATTGCTAGACAAAATATGAACAGAATGGATAGAAGAGACACTCATAGCAGTCAAAGTGGCAAGGATGCACAAGGTTCTTCATCAGATAATGCAGCTCAAGCAACTTCACTGACAATTCGAGAGATAGATCAGTTGACTGTAACTCATCCTGCCACAGGCACACTGAGTAAAAGGCAAAAGAAACGTGGATCAACATCAGGAAATCCTGGGCAATCATCAAGCTCATCCCATAACCCTGTCTTGAATTCTGAAGTAGTAGACTTATCACCAGAACCCAGTTATACCAACAGATTTACTGAAGGCTTAGATGACAATGACAATGACAAAGCTCGAGCAAGGCAAGTAGAAGCAGATGAGAGATTGGCACGTGAACTCCAAGAACAACTGTATCATGATGATATTTTTGAAGGGAGAGGGCAGATTGATGAACATTTAGCCTTGGCACTGCAGCAAGAGGAGAATCTTATTCGTACTTCTTTTGATAATCACCAAACATCAAATCCTATGTTTCCGAGGGCAAATAGTCAGCCTCGTTCACGGCCACATCAAAATCCTTCTAATAGGAGGAGAGTTCCACCTCAAGTTCCTTCCTCTAATAGAATGTCACAGTTGAGGTCACAGTTGAGGAGTCACATCGCAAATCGTTCCCGAAGACCAGCCATATCATCCAGAGGACGACGCCCCCGGTTTCCTGTGGATATGGACTTAAACATGAGGCTTGATATATTGGAAGCATTAGAGGATGCAGTAGGGGATTTTGCAGATTTAGGGATGGGTAATGACATCTTTCTTGCTCAACATGATTTCAATGAACATGATTATGAAATGTTGTTGGCCCTTGATGAGCAAAACCACCGACATACTGGTGCATCCTCCAATCAGATCAATAGTTTGCCGGAGTCCACCATCCAGAATGACAACTTCGCAGAGGCCTGTGCAATATGCCTTGAGACCCCAGGCAAGGGTGAAATTATTCGCCATCTTCCCTGTTTGCACAAATTTCACAAAGATTGTATTGATCCTTGGCTCCATAGGAAAACATCATGCCCGGTGTGCAAGTCATCTATCACCTAA 2148 0.425 MEPLEIDLVDIPDTPDRLTTRPGDQKHVRNPEKREKVFPAADEMKKLSNYIILSPSKAPYPSYNGPFFRKTQTEKTLGLGTAHSIGAEKMERGKTVSSRFPAKSSRHGPRSVLDFTEENENSQQLKPAFSHHGSRDKAVEDKKVTSAGNTSSRVVADSSTAFRDKMLPGPNISQERGKGIALPNDSHPPLNTEKQLSLPPQISTTPRVRGQKRLVRNGCISPYNIANRANQATIKDNHQTKEVEESHAVDLVSTNPISTISVEDIVAEERGCNRVKGKQVLIHPSSYGLNTGTVRMASSNPATDFEEGHSASNAVRNSLKISGGQDGWRTTHAHNSIDQHPYDVNGHNLRRSHDVGRFIARQNMNRMDRRDTHSSQSGKDAQGSSSDNAAQATSLTIREIDQLTVTHPATGTLSKRQKKRGSTSGNPGQSSSSSHNPVLNSEVVDLSPEPSYTNRFTEGLDDNDNDKARARQVEADERLARELQEQLYHDDIFEGRGQIDEHLALALQQEENLIRTSFDNHQTSNPMFPRANSQPRSRPHQNPSNRRRVPPQVPSSNRMSQLRSQLRSHIANRSRRPAISSRGRRPRFPVDMDLNMRLDILEALEDAVGDFADLGMGNDIFLAQHDFNEHDYEMLLALDEQNHRHTGASSNQINSLPESTIQNDNFAEACAICLETPGKGEIIRHLPCLHKFHKDCIDPWLHRKTSCPVCKSSIT 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01812 715 SUPERFAMILY RING/U-box 669 714 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 362 466 - -
Arst2g01812 715 SMART ring_2 670 710 IPR001841 -
Arst2g01812 715 MobiDBLite consensus disorder prediction 377 458 - -
Arst2g01812 715 FunFam RING/U-box superfamily protein 635 715 - -
Arst2g01812 715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 636 715 IPR013083 -
Arst2g01812 715 PANTHER SI:CH211-59O9.10 356 715 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 144 158 - -
Arst2g01812 715 Coils Coil 465 485 - -
Arst2g01812 715 Pfam Ring finger domain 669 711 IPR001841 -
Arst2g01812 715 CDD RING-H2_PA-TM-RING 670 711 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 519 568 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 324 342 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 519 585 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 10 30 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 115 129 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 82 178 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 362 376 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 324 349 - -
Arst2g01812 715 MobiDBLite consensus disorder prediction 1 30 - -
Arst2g01812 715 ProSiteProfiles Zinc finger RING-type profile. 670 711 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01812 Arst-Chr2 51934041 51943304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01812 462 715 C3H Transcription Factor Family AT1G04790 50.575 1.63e-68 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01812 - - aprc:113872307 825.083