Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01794 ATGGCTTGTGAGGTTCTGATTCTCCAAAAAGAACTAGACGTGCTGACTGTTTGTAAACCTGCATCTGTCCCTGAGCATCACATTCGAACTGGTTGTGGTTCTGTGTCTGTTATAGTGTATGGGGATCCTGAGAAACCAGCTCTGATCACTTATCCAGACCTAGCACTAAATTATATGTCATGTTTCCAAGGATTATTTTTCTGTCCAGAGGCAGCTTCTTTGCTGCTTCACAACTTCTGCATATATCATATCAGTCCTCCTGGACACGAGAGCTGGTACCAGGAGGTATCAAAGCTAAAGGCAAAGTATGAGTCTCTACAAAGGACTCAGAGGCACTTGTTTGGGAAAGATCTTGGACCATTGAGCATAAAGGAGCTGCAGAATCTTGAGAAACAGCTTGAAGGTTCTTTAGCACAGGCCAGGCAGAGAAAAGTCAGTGCAAACACCTATCTATTATCTTTCATTTGCTTCTTTCTTTTTGTTCAAATTTGTTCTTTGATTGCTTTCCTTTATCTTTTTTTTTATATATAA 531 0.4049 MACEVLILQKELDVLTVCKPASVPEHHIRTGCGSVSVIVYGDPEKPALITYPDLALNYMSCFQGLFFCPEAASLLLHNFCIYHISPPGHESWYQEVSKLKAKYESLQRTQRHLFGKDLGPLSIKELQNLEKQLEGSLAQARQRKVSANTYLLSFICFFLFVQICSLIAFLYLFFYI 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01794 176 Pfam K-box region 89 145 IPR002487 GO:0003700|GO:0005634|GO:0006355
Arst2g01794 176 Coils Coil 89 109 - -
Arst2g01794 176 Coils Coil 123 143 - -
Arst2g01794 176 Gene3D alpha/beta hydrolase 17 119 IPR029058 -
Arst2g01794 176 ProSiteProfiles K-box domain profile. 89 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Arst2g01794 176 Pfam Ndr family 25 98 IPR004142 -
Arst2g01794 176 PANTHER N-MYC DOWNSTREAM REGULATED 19 92 IPR004142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01794 Arst-Chr2 49951533 49956005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01794 90 145 MADS-box Gene Family AT2G45650 62.500 1.97e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01794 - - adu:107474435 362.073