Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01788 ATGGAAGGCATTCCAATAGGGAGGAAACTCAACATATTAGTACATAGAAACTACCGTGAGCTGGTGAAGACGTGGAAGCACATGTTCAATACCACCATTCTCTGGAGTAGAGAGATGGATGAAATTGTAGTTCAACCTGGTGAGAGATGCCATGTCCTCACTTATGAAGACGAAGAAGGAGATCTTGTTATAGTTAGGGATGTTCCTTTGGAGATGTTTGTTTCCACTGTAAAAAGGTTGAAGATCACAAGGGTAGCCACATTCACTACCTCTTGA 276 0.4203 MEGIPIGRKLNILVHRNYRELVKTWKHMFNTTILWSREMDEIVVQPGERCHVLTYEDEEGDLVIVRDVPLEMFVSTVKRLKITRVATFTTS 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01788 91 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 85 IPR003311 GO:0005634|GO:0006355
Arst2g01788 91 ProSiteProfiles PB1 domain profile. 1 87 IPR000270 GO:0005515
Arst2g01788 91 Pfam AUX/IAA family 1 84 IPR033389 -
Arst2g01788 91 SUPERFAMILY CAD & PB1 domains 2 82 - -
Arst2g01788 91 Gene3D - 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01788 Arst-Chr2 49837260 49851373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01788 1 82 B3 DNA Binding Superfamily AT4G23980 32.530 3.15e-07 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst2g01788 AUX_IAA 8.1e-20 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01788 K14484 - adu:127744859 187.193