Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01787 ATGGCGAACAAACTGAGCGCTGTTATTATCATGGGGCTTGCGATCTTTAGCCTTGTTTCGGTGACATCCGCTACTTCGGGAACAGCAACTTACTATACAGTTTACACTCCATCCGCATGCTACGGGTACGAGGACGAGGGAACGATGATTGCAGCTGCAAGCGAGGGAATCAACAATGGAGGTGCATGTGGCCAAATGTATAAGATCACATGCACAGGTGCGACCAATGCCGGCGTCACTCAACCGTGCACCGGCGCCAGTGTTACCGTCAAGGTTGTCGATCTTTGTCCCTCTCCAGGCTGCCAGGGAACATTTGATCTCTCTCAAGAAGCTTTCTCTACGATAGCTAACGTCAATGCTGGAAAAGTTGATATTAACTATACCCCGGTTTGA 393 0.4962 MANKLSAVIIMGLAIFSLVSVTSATSGTATYYTVYTPSACYGYEDEGTMIAAASEGIXNNGGACGQMYKITCTGATNAGVTQPCTGASVTVKVVDLCPSPGCQGTFDLSQEAFSTIANVNAGKVDINYTPV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01787 131 CDD DPBB_EG45-like 25 129 - -
Arst2g01787 131 SMART dpbb_1 50 128 IPR007112 -
Arst2g01787 131 SUPERFAMILY Barwin-like endoglucanases 15 131 IPR036908 -
Arst2g01787 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 129 IPR044206 GO:0009627|GO:0048046
Arst2g01787 131 Pfam Lytic transglycolase 56 128 IPR009009 -
Arst2g01787 131 Gene3D - 16 131 IPR036908 -
Arst2g01787 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 131 IPR007112 -
Arst2g01787 131 FunFam Barwin-related endoglucanase 24 130 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01787 5 131 Expansin Gene Family AT4G01630 34.043 1.46e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01787 - - ahf:112743758 251.521