Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01686 ATGGCAGATCCAGCTAGTTATGGGAATTATGACCGTGATATTGAGCAAGCACTAATTATTTTAAAAAAGGGCAGTCAATTAGTAAAGTATTGTCGAAAAGGGAAGCCAAAAGTTGTTCCATTTAGGCTCTCAGCAGATGAAACAAAGCTGATTTGGCTTTCTCATGGAAAGGAAAAGAGTCTAAAGTTATCTTCTGTTTCACGCATAGTCCCTGGACAGAGAACAGCTGTCTTTAGAAGATATTTGCGCCCTGAAAAGGACTACCTGTCATTTTCACTTATTTACAAAAAAGGGGAACGATCACTTGATTTGATCTGCAAGGACAAAGCTGAGGTGGAGGTATGGTTTGCGGGCCTTAACGCATTAATATCTTCTGGACATAATAGTAAGCGCCCTAGAAGTGAGTTTACAGATGTGAGTTTTAATGGAATTTCTTTGAATGATACTCTATTTTTCAGATTACTTAGTTTACATCTTGCCAAATAGATTGTTCTGACTTTGCTCATAATGAAAGCTTCAAATATGCCAGTGAGGACAAGTGGAGGAGATGGTTCTTCTCGTATCAGTGTGTCAAGTGTTGGCTGTGCAAGTAGTGTATTGTCCGGACAAGACGACATAGAATCTCTCGGAGATGTCTTCATATGGGGAAGAATTTGGGCACATGGAGCCTCACATGATGGGTTTGGGAGTCAGGTCCTTTCGACAAAGAATGTGCTAACTCCTAAGTCATTAGAGTCTAATATTGTTATTGATGTTCATCAGATCGGGTGTGGTGTACATCACATTGCTCTCATTACAAGGCAAGGAGAGGTGTTTACATGGGGAGATGACTCTGGAGGGAGACTTGGTCATGGGCTTCATAAAAATCGTGGGAGACTGCAACTCGTGGAGTCTTTAGCTGTTACTAGTGTAGGTTTTGTTGCATGTGGTGAATACCATACTTGTGCTCTGTCTACACATGGTGATATATTTACTTGGGGTGATGACATACATAATGCAGGACTTCTTGGGCATGGCACTGATGTGAGCCATTGGATACCAAAGAAGATTGGAGGACCTTTAGATGGACTTCTCGTTGTATCTGTAGCATGTGGCACATGGCATTCAGCATTGGTTACCTCCATTGGAAAACTGTTTACCTTTGGTGATGGAAAATTCGGTGTCTTGGGCCATGGAGATCGAGATAGTGTATCATATCCGAAGGAGGTGCGCTTAATGTGTGGACAAAGGGCAATCAAAGTTGCATGTGGAGTATGGCACACTGCAGCAATTATAGAGGTTGTTGATCATTGTGGTACAAATGCATCTTCATCTAGGAAGCTTTTCACATGGGGCGATGGCGACCAATATCGTCTTGGCCATGCTAGCAAGAATACCTATCTTCAACCAACTTGTGTCTCTGCACTGAGTGACTATAGTTTTCATCAGGTAGCATGTGGGACCACTATGACTGTTGCCCTCACTGCCTCTGGTCAGGTCTTTACTATGGGAGAAACTAAATATGGTCAACTAGGAAATCCAATGTCCAATGGAAGAACACCAAGTCTGGTCAAAGATAATTTAGTGGGTGAGGTTGTAGAGGACATATCATGTGGTTCACATCATGTGGCTGTGGTGACTTCAAAAGGTGAACTATATACATGGGGCAGAGGTGCCAATGGAAGATTGGGACATGGAGACACAGATGACCATAACACACCAATTTTGGTTGAAGCCTTTAGAGACAGACACGTAAAGCATGTTTCGTGTGGCTCAAGCTTTACATTTTGTGTATGCATACATAAGTGGATTTCTGGAGCTGACCAATCACTTTGCTCGGGTTGCCGGCAACCATTTGGTTTTACAAGAAAAAGGCATAATTGTTATAATTGTGGATTGGTGTATTGCCATCCTTGTAGCTCCAAAAAGTCAATAAGAGCAGCATTGGCTCCAACACCTAGCAAACCACATCGTGTGTGTGACTCTTGTTATTCTAAGCTTAAAGTTCCTGAGACTAGCAGTGCTTCTTCCACTTATAATAAGGATGTTACTCGTGCTCATAGAAAGGAAAGATTTGATACAAGAGAGGCAAAGAATGCAAAAATTCTCTCATCTCCCAGCACCGATCCTGTAAAATACTTTGAGACATTGACGGGTAAGAATATAACTTTGCATGACTCTTCTTCCACAGTCCGAGTTGCTCAAGCTCCTTTGCGTATTCCAATGGATAATGTGTTTCCAAGTTCATCTAGTGTCATGCAGAATGCTTCTGTTCCCGTTACACAATCAACTCAACCTCCAACTCCACCTACACCAAGTAATTTAAGACCTCCATCACCGTATGCAAGGAGACCAAGTCCACCACGTTCTAGTTCCCCCGGATTTTCAAGAAGCCTCATTGATAGTTTAAAGAAGACAAATGATCTTTTGAATCAAGAAGTCTCTAAATTAAAAAACCAAAATCAAAATTTGAAGCAGAAGAGTGACATGCAAGATATCAAGATTCGGGAACTTGAGAAAAAGATTGAGGAATCTACCTCATTGGTTAAAGAGGAATCATCTAAGCATAGAATACTGAAGGAATATCTCCAGTGCATGACAGATCAGTTGAGGGAAGTGACTGAGAACTTGCCACCAGTTCCTGACTATGAATCTTTAATTACCTTGCATACTCATGCTGAGACATTTCTTAAAGAAAATATGGAATTCAAATCCTTATTTGCATCAACGTTGGAATCAAGGTCACAAAGTGCAAATGATTTACATGGCGCACACAATGACTCTCGTAAACAGCCAGAACAAAAAATGGAAGAAACCGTTGATGCTGCTGGAGCTGGTTCATCTATGAATGGAGGAAATGCTCTTCAAGAAAGCAATGAGTCATCTTTGTTGAGTCCAAATAAGCCAAGATCATCTAATCCACACAGACCCGGGAATGAGAAACAAGAAGAAATAGTGACCATCGAACAATTTGAACGTGGTGTTTATGTAACATTTGTAGAATTACCTTCTGGTGGAAAAGTTTTTAAACGAATTAGATTCAGTAAGCGCAAATTTGACGAGACTCAAGCAGCAGAATGGTGGAACCAAAACAAAGATAGGGTGCTTATGAAATATAGTCCAGAATCTGTACAGGATGCAGCTACTGGCTCATCTATTAGCCCCACCAGAAGTTGA 3156 0.4122 MADPASYGNYDRDIEQALIILKKGSQLVKYCRKGKPKVVPFRLSADETKLIWLSHGKEKSLKLSSVSRIVPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKDKAEVEVWFAGLNALISSGHNSKRPRSEFTDVSFNGISLNDTLFFRLLSLHLAKXIVLTLLIMKASNMPVRTSGGDGSSRISVSSVGCASSVLSGQDDIESLGDVFIWGRIWAHGASHDGFGSQVLSTKNVLTPKSLESNIVIDVHQIGCGVHHIALITRQGEVFTWGDDSGGRLGHGLHKNRGRLQLVESLAVTSVGFVACGEYHTCALSTHGDIFTWGDDIHNAGLLGHGTDVSHWIPKKIGGPLDGLLVVSVACGTWHSALVTSIGKLFTFGDGKFGVLGHGDRDSVSYPKEVRLMCGQRAIKVACGVWHTAAIIEVVDHCGTNASSSRKLFTWGDGDQYRLGHASKNTYLQPTCVSALSDYSFHQVACGTTMTVALTASGQVFTMGETKYGQLGNPMSNGRTPSLVKDNLVGEVVEDISCGSHHVAVVTSKGELYTWGRGANGRLGHGDTDDHNTPILVEAFRDRHVKHVSCGSSFTFCVCIHKWISGADQSLCSGCRQPFGFTRKRHNCYNCGLVYCHPCSSKKSIRAALAPTPSKPHRVCDSCYSKLKVPETSSASSTYNKDVTRAHRKERFDTREAKNAKILSSPSTDPVKYFETLTGKNITLHDSSSTVRVAQAPLRIPMDNVFPSSSSVMQNASVPVTQSTQPPTPPTPSNLRPPSPYARRPSPPRSSSPGFSRSLIDSLKKTNDLLNQEVSKLKNQNQNLKQKSDMQDIKIRELEKKIEESTSLVKEESSKHRILKEYLQCMTDQLREVTENLPPVPDYESLITLHTHAETFLKENMEFKSLFASTLESRSQSANDLHGAHNDSRKQPEQKMEETVDAAGAGSSMNGGNALQESNESSLLSPNKPRSSNPHRPGNEKQEEIVTIEQFERGVYVTFVELPSGGKVFKRIRFSKRKFDETQAAEWWNQNKDRVLMKYSPESVQDAATGSSISPTRS 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01686 1051 Gene3D - 168 434 IPR009091 -
Arst2g01686 1051 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 491 542 IPR000408 -
Arst2g01686 1051 SMART fyve_4 591 662 IPR000306 GO:0046872
Arst2g01686 1051 ProSiteProfiles BRX domain profile. 978 1033 IPR013591 -
Arst2g01686 1051 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 414 424 IPR000408 -
Arst2g01686 1051 Gene3D - 13 132 IPR011993 -
Arst2g01686 1051 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 439 490 IPR000408 -
Arst2g01686 1051 Coils Coil 793 848 - -
Arst2g01686 1051 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 376 427 IPR000408 -
Arst2g01686 1051 SUPERFAMILY RCC1/BLIP-II 210 596 IPR009091 -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 1037 1051 - -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 916 930 - -
Arst2g01686 1051 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 57 854 - -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 756 780 - -
Arst2g01686 1051 Pfam Transcription factor regulating root and shoot growth via Pin3 981 1032 IPR013591 -
Arst2g01686 1051 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 269 320 IPR000408 -
Arst2g01686 1051 Pfam Regulator of chromosome condensation (RCC1) repeat 321 371 IPR000408 -
Arst2g01686 1051 Pfam Regulator of chromosome condensation (RCC1) repeat 269 317 IPR000408 -
Arst2g01686 1051 Pfam Regulator of chromosome condensation (RCC1) repeat 441 487 IPR000408 -
Arst2g01686 1051 Pfam Regulator of chromosome condensation (RCC1) repeat 542 591 IPR000408 -
Arst2g01686 1051 Pfam Regulator of chromosome condensation (RCC1) repeat 376 424 IPR000408 -
Arst2g01686 1051 Pfam Regulator of chromosome condensation (RCC1) repeat 490 539 IPR000408 -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 910 978 - -
Arst2g01686 1051 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 599 661 IPR017455 -
Arst2g01686 1051 CDD FYVE_like_SF 605 657 - -
Arst2g01686 1051 Gene3D - 435 607 IPR009091 -
Arst2g01686 1051 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 608 667 IPR013083 -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 1032 1051 - -
Arst2g01686 1051 CDD PH_PLC_plant-like 12 124 - -
Arst2g01686 1051 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 255 265 IPR000408 -
Arst2g01686 1051 SUPERFAMILY PH domain-like 13 123 - -
Arst2g01686 1051 SUPERFAMILY FYVE/PHD zinc finger 595 666 IPR011011 -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 942 966 - -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 782 796 - -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 735 796 - -
Arst2g01686 1051 MobiDBLite consensus disorder prediction 737 755 - -
Arst2g01686 1051 Pfam FYVE zinc finger 595 660 IPR000306 GO:0046872
Arst2g01686 1051 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 321 375 IPR000408 -
Arst2g01686 1051 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 543 594 IPR000408 -
Arst2g01686 1051 Pfam Pleckstrin homology domain 15 123 IPR001849 -
Arst2g01686 1051 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 362 372 IPR000408 -
Arst2g01686 1051 PRINTS Chromosome condensation regulator RCC1 signature 321 337 IPR000408 -
Arst2g01686 1051 PRINTS Chromosome condensation regulator RCC1 signature 362 378 IPR000408 -
Arst2g01686 1051 PRINTS Chromosome condensation regulator RCC1 signature 538 559 IPR000408 -
Arst2g01686 1051 PRINTS Chromosome condensation regulator RCC1 signature 378 392 IPR000408 -
Arst2g01686 1051 PRINTS Chromosome condensation regulator RCC1 signature 480 498 IPR000408 -
Arst2g01686 1051 PRINTS Chromosome condensation regulator RCC1 signature 271 287 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01686 Arst-Chr2 41171472 41177205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01686 981 1033 Major Intrinsic Protein MIP AT1G31880 47.170 1.62e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01686 - - gmx:100812689 1269.99