Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01678 ATGAACTCCAACAACACCACCTCCAATACTCAGTCAATGGTGACACCAACGCCAACTGCCACAACCGCCACCACCGCCACTGATGCCTCTGCCAAGAAGGTCAGAAAGCCTTACACCATTACCAAGTCCAGAGAGAGCTGGACTGACGAAGAACACGACAAGTTTCTAGAAGCTCTTCAGCTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTAGGATCCAAAACAGTTATTCAGATCCGAAGCCATGCCCAAAAATACTTTTTGAAAGTTCAAAAGAATGGAACAGTAGCACATGTTCCTCCTCCTCGCCCTAAGCGCAAAGCCGCACATCCCTACCCACAAAAGGCATCAAAAAATGTTTTGATGGCACTGCCAGCATCCATTGCTTATGCTCCTTCGACAAATGCCCTTGCACCTGGGTATGCCACATGGGATGAAGCTTCTCTGCTGGTGAACACCGGATCAAATAAATCATTGACCTGTCAAGATGAACTCAGCAATCTTCATGGAAACGAAGCTGATATTGGATCGAAGGGGATAACACAGATTAGTAACAGCAGTCTTAATGGTGTCGGGAACTCAACTAGAAAGCTATTGTCTTCTGAGATACCAAAGCAAGGGAAACCAGCGCCAGTTATTCATGGTTTGCCAGATTTTGCCGAAGTTTACAGCTTCATTGGAAGTGTTTTTGATCCTGATACAAATAACCATGTCGAGAAGCTGAAGGAAATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAACTTGTCTAGCCCTGAATTTGAGCCGATGATGTCAAACTGTTTAA 835 0.4359 MNSNNTTSNTQSMVTPTPTATTATTATDASAKKVRKPYTITKSRESWTDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLMALPASIAYAPSTNALAPGYATWDEASLLVNTGSNKSLTCQDELSNLHGNEADIGSKGITQISNSSLNGVGNSTRKLLSSEIPKQGKPAPVIHGLPDFAEVYSFIGSVFDPDTNNHVEKLKEMDPINFETVLLLMRNLTVNLSSPEFEPMKNVLLSTYDINTMTVGVTVGVTAGIDVKKQPNDLSCQTV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01678 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 93 IPR017930 -
Arst2g01678 312 MobiDBLite consensus disorder prediction 1 29 - -
Arst2g01678 312 MobiDBLite consensus disorder prediction 1 34 - -
Arst2g01678 312 Gene3D - 47 94 - -
Arst2g01678 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 42 91 IPR006447 GO:0003677
Arst2g01678 312 FunFam protein REVEILLE 6 isoform X1 46 94 - -
Arst2g01678 312 ProSiteProfiles Myb-like domain profile. 39 89 IPR001005 -
Arst2g01678 312 Pfam Myb-like DNA-binding domain 44 89 IPR001005 -
Arst2g01678 312 SMART sant 43 91 IPR001005 -
Arst2g01678 312 CDD SANT 46 89 IPR001005 -
Arst2g01678 312 PANTHER SWI/SNF COMPLEX-RELATED 10 266 - -
Arst2g01678 312 ProSiteProfiles SANT domain profile. 42 95 IPR017884 -
Arst2g01678 312 SUPERFAMILY Homeodomain-like 38 94 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01678 Arst-Chr2 40746190 40750869 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst2g01678 Myb_DNA-binding 1.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01678 - - vra:106754423 475.707