Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01665 ATGGATCTTGGTGTGGTGGGTTCAGAAGCTGGGTTTGTTCCATTTGGATCTGGGTTCGTTAAGCATCAAAGATCTGAAGAGGAGGTGAGTAATAATGATCATAATAATAGAAGAGGGGCAAAACTGTCAAAGGTTAATATTACTAGTGGTGATGATGATGATGTCATCACAACAACAACATCAAAGGGAATGTTGTTTTTTCAGAATCATCAGAGGAACAACAACAACAATAGCTCTTGTTGTAATGTGTTGTTGAGATCTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGGAAATGACAATGTTGCCATTGCTCTCTTCAAACAAGAAGGAGAAGAGAAGATGCTGAGTTTCTCAACAACACCAACACCAAAGTCAGAGACTTTGATTGTGGAAAAGGCTTCTTCAAATGCTACATTGCACACTTCTTATCACCCTTTCTCTAGTTACAACATAAATAATAATGCAGGTTACAATAACAGTAATTGGGGAATGATGATGATGGGAAATAGTAGTAGTAATAATAATGTGGGAAGAGTGGTAGGAGCTGCATTATTCACTCCCTCACAGTGGATGGAGCTGGAGCACCAAGCACTCATTTACAAGTATATCACTGCAAATGTTCCTGTTCCTTCTCATCTTATTCCAATCACTAAAGCCCTTCATTCCACTTCTCCATTCTCTAACTTTCCTAATCCACTTCTTAGACCCAATCCTTTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAGCAGCACCGATCCGGAGCCAGGTCGGTGCAGGAGAACCGATGGGAAGAAATGGCGGTGCTCGAGGGACGCAGTTGTGGACCAGAAGTACTGCGAGCGTCACATGAACCGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCTGCTGCCATCACCACCACCACCACCACCACAACCACCACTTCTAACTCAAAGCTATTGTTGCCTAACAGCAACAATTCAAGTTCTTCATTCTCCATTGTGGGGAACACTGCTTCCAACAACAATAGCAACACTATTTCATTTGGAAACTGCCATGAACACAAGAATGTTATTCAGCAGCAGCAGCCTGTTGCATCTGATGCTTCTGCTGCTAATAATATCAGCAGGTTGGCTGTCGCAGGCTTAACACAGCCTAATATGGCTTCAAGGACGTCATTGTGTCGTGGCCATGTATTGGGATGTGACATTGTTTTACATTGGCAGTCGCACAAACCGAAAAACCCTTGTTTTTCCGGACTTGAGACCGGCTATGTGAACATAGGCCGAGTTAGGTTAGAGTATACTTTTAAAAAAGAAAAAGATGTCTTCTGCAATTTAACTTTTTAA 1377 0.4139 MDLGVVGSEAGFVPFGSGFVKHQRSEEEVSNNDHNNRRGAKLSKVNITSGDDDDVITTTTSKGMLFFQNHQRNNNNNSSCCNVLLRSNNNNNNNNNNNNNNNNNNGNDNVAIALFKQEGEEKMLSFSTTPTPKSETLIVEKASSNATLHTSYHPFSSYNINNNAGYNNSNWGMMMMGNSSSNNNVGRVVGAALFTPSQWMELEHQALIYKYITANVPVPSHLIPITKALHSTSPFSNFPNPLLRPNPLGWGGFHLGFSSSTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAAAITTTTTTTTTTSNSKLLLPNSNNSSSSFSIVGNTASNNNSNTISFGNCHEHKNVIQQQQPVASDASAANNISRLAVAGLTQPNMASRTSLCRGHVLGCDIVLHWQSHKPKNPCFSGLETGYVNIGRVRLEYTFKKEKDVFCNLTF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01665 458 PANTHER GROWTH-REGULATING FACTOR 5 144 373 IPR031137 GO:0005634|GO:0006351|GO:0032502
Arst2g01665 458 MobiDBLite consensus disorder prediction 78 107 - -
Arst2g01665 458 SMART QLQ_2 192 228 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst2g01665 458 Pfam WRC 263 305 IPR014977 -
Arst2g01665 458 Pfam QLQ 194 223 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst2g01665 458 MobiDBLite consensus disorder prediction 310 333 - -
Arst2g01665 458 MobiDBLite consensus disorder prediction 289 333 - -
Arst2g01665 458 ProSiteProfiles QLQ domain profile. 193 228 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst2g01665 458 ProSiteProfiles WRC domain profile. 262 306 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01665 Arst-Chr2 39808058 39812474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01665 117 360 GRF Transcription Factor Family AT2G22840 46.667 1.46e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Arst2g01665 WRC 3.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01665 - - adu:107474230 586.26