Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01650 TATGCAAACGCCACTATTGATGATCACTCTCACTCTTCAATTCTCACCCTTACCAACCATACCTCTTTTTCTATTGGCCGTGCTTTCTACCCTTCCAAGATCCCAACAAAATCTTCCTTTTCTTCCAACCCTTTACCGTTCTCAACCTCCTTCATCTTCTCCATTGCACTATTCAAACACCTTCTCTCTGGCCATGGTTTTGTGTTCTTGTTCTCACCTTTTGAAGGAGCAAACGGGGTTAGCTCAGCTCAGCACCTTGGCCTCTTCAACTTGACCAACAATGGTAACCCCAAAAACTATGTTTTTGGGATTGAGTTTGATGTGTTCAAGAACCAAGAATTCAATGACATCAATGATAACCATGTGGGTTTGGATGTGAATTCTCTTACTTCTTTGACCTCACAGGATGATATTTGGGTCAGTGGAAAACATGATGAAAAGTTTAAGGAATTGAAGCTTAACAATGGTGAGAACTATCAAGTGTGGATTGAGTATTCAGATTCTAGAGTTAATGTAGCAATGGCTATTGCAGGGAAAAGAAGGCCTAATAGGCCTTTGATTAGTGAACTTGTGAATCTTTCTGATGTCTTTTTGGATGAAATGTTTGTGGGATTTTGTGGGGCAACAGAGCAACTTATTGAGAGTCACAAGATTTTGGCATGGAGCTTTAGCAACTCAAATTTTTCGATCGGCGATGGTTTGGTGACTACGAATTTGCCTTCATTTGGTTTTGTTTTAGGGATCAGTTTTGGAATTTTTATCTTTGTTATTGGTAGTGCAGCCATGGTGTTTGTTGTTTTGCTCAAAAGAAAAAGAAGCAAAAGAATGGAGGAAGAGGGAGATATTGAAGACTGGGAATTAGAGTATTGGCCACACCGTATTAGTTATGAAGACATTTATGCTGCAACTAAAGCATTTTCAGAACAGAATATAATTGAGTTTGGAGGTATGCTGAAGGATGTGGCTATGGGGGTATTGTATTTGCATGAGAGTTGGAAAGTTAAGGTGTTGCATAGGGACATAAAAGCAAGCAATGTATTACTTGAGAAGGATATGAATGCAAGGTTGGGGGATTTTAGACTCGCCCGGATGCATCATCATGAGCAGATACCTAACACCTCTCGAGTGATCAGAACGGTTGGCTACATGGCACCGGAACTACTAAGAACCGGGAGAGCCTCGAGCAGCGGCCATGGCTTCCACCTTGCATTTTCATAA 1218 0.4097 YANATIDDHSHSSILTLTNHTSFSIGRAFYPSKIPTKSSFSSNPLPFSTSFIFSIALFKHLLSGHGFVFLFSPFEGANGVSSAQHLGLFNLTNNGNPKNYVFGIEFDVFKNQEFNDINDNHVGLDVNSLTSLTSQDDIWVSGKHDEKFKELKLNNGENYQVWIEYSDSRVNVAMAIAGKRRPNRPLISELVNLSDVFLDEMFVGFCGATEQLIESHKILAWSFSNSNFSIGDGLVTTNLPSFGFVLGISFGIFIFVIGSAAMVFVVLLKRKRSKRMEEEGDIEDWELEYWPHRISYEDIYAATKAFSEQNIIEFGGMLKDVAMGVLYLHESWKVKVLHRDIKASNVLLEKDMNARLGDFRLARMHHHEQIPNTSRVIRTVGYMAPELLRTGRASSSGHGFHLAFS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01650 405 PANTHER - 13 317 - -
Arst2g01650 405 CDD lectin_legume_LecRK_Arcelin_ConA 3 226 IPR001220 GO:0030246
Arst2g01650 405 Pfam Protein kinase domain 295 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01650 405 ProSiteProfiles Protein kinase domain profile. 147 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01650 405 Gene3D Transferase(Phosphotransferase) domain 1 297 400 - -
Arst2g01650 405 SUPERFAMILY Concanavalin A-like lectins/glucanases 5 228 IPR013320 -
Arst2g01650 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 336 348 IPR008271 GO:0004672|GO:0006468
Arst2g01650 405 Gene3D - 1 230 - -
Arst2g01650 405 Coils Coil 268 288 - -
Arst2g01650 405 SUPERFAMILY Protein kinase-like (PK-like) 316 392 IPR011009 -
Arst2g01650 405 Pfam Legume lectin domain 11 227 IPR001220 GO:0030246
Arst2g01650 405 FunFam L-type lectin-domain containing receptor kinase V.9 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01650 Arst-Chr2 39409493 39410710 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01650 317 400 Receptor kinase-like Gene Family AT4G04960 63.095 9.18e-28 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst2g01650 Lectin_legB 5.5e-53 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01650 - - ahf:112795063 744.191