Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01553 ATGGAAGAAGCAACAACATCTTCAACATCATCAACAATCATGGCAGCACTCTCCACTCTCTCTCCCACCACCGTCTCCAATCTCACCCACTCCATCATCTCCGCCACCAACCACCGCACCCACCGCCTCGCCCTCCTCCTCTCCTCCCCAACCCTCTTCTCTCTAACCCTCCACTATCTCCATACCCTCTCTCTCCACCAAAAAACCCTCCTCATCGCGCGCCACCTCCTCTCTTCTCTCCACACACTCACTCGCCACGCCGCAATGCCGCCACCATTGTCAACTTCAATGCGGCAACGCGATCTCGACGCGGTTCTCCTCCTTCTCTTGTTCTGCGAGACGCACAACCACAACCCCGAGCTTTTAGAAGATTCCTTTTCGGAATGGAGGGTGAATTTGAGAAGGGCTTTCCGGGAGAAAATCTTGATCCCTTATGTGGAAACGGTGGTTCGGTGCATGGGGCTGGTGGGGTCCATGGGATGTTGTGTAGGGAGAGGGAATAATAAGGAGGAGGTGGAGGTGGCAGCAGCGGCGGCGGCGGTAGTGGCTTTGCCGGCGGTGGAGGTGGCGGTTGGAGGAAAAGAGTGTGTGATTTGCAAAGAAGAGATGCGCGTGGGGAGGGACGTTTGCGAATTGCCATGTCAGCATTTGTTTCATTGGATGTGCATTTTGCCGTGGCTTGGAAAGAGGAACACTTGTCCCTGCTGCAGGCTCAGGTTGCCGTCCGATGATGTTTTCGGAGAGATCCAACGGCTGTGGGGTGTTTTGGTTAAGATGGGTGGAAAAGAATGTGGAGGCGGTTAA 804 0.5473 MEEATTSSTSSTIMAALSTLSPTTVSNLTHSIISATNHRTHRLALLLSSPTLFSLTLHYLHTLSLHQKTLLIARHLLSSLHTLTRHAAMPPPLSTSMRQRDLDAVLLLLLFCETHNHNPELLEDSFSEWRVNLRRAFREKXILIPYVETVVRCMGLVGSMGCCVGRGNNKEEVEVAAAAAAVVALPAVEVAVGGKECVICKEEMRVGRDVCELPCQHLFHWMCILPWLGKRNTCPCCRLRLPSDDVFGEIQRLWGVLVKMGGKECGGG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01553 268 Pfam Ring finger domain 195 238 IPR001841 -
Arst2g01553 268 CDD RING-H2_PA-TM-RING 196 238 - -
Arst2g01553 268 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 132 242 - -
Arst2g01553 268 SMART ring_2 197 237 IPR001841 -
Arst2g01553 268 SUPERFAMILY RING/U-box 193 243 - -
Arst2g01553 268 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 166 244 IPR013083 -
Arst2g01553 268 ProSiteProfiles Zinc finger RING-type profile. 197 238 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01553 Arst-Chr2 31839659 31841012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01553 1 259 C3H Transcription Factor Family AT5G02750 49.643 5.04e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01553 K11982 - gmx:100818800 303.138