Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01519 ATGGGTAACTCTCACTCACATCGCAAACACCGTAACTCCCTCTCTCAAAACAATAACTCTTCTTCTTCTATTGCTACTCCTCCACACTATAGATATGGTGCTCATCATTATCCAAAACAACAACACTGTAATAGGACGATGGTGAGCAGCAAGATTTCTTTGCCTTACGGGCGCGTGGACACCACGCTCCGAGAACTCGCTGCCAAGGCCGAAGGCTTCGGACGCTTCGCCATCGGCGGCCTCCATGGTCCGCTATACCATGTCACTAATCTCGCAGGTTTCTTTCATGATGGACCAGGATCACTACGCGATGCATGTCGTAGAAAAGAACCATTATGGATTGTATTTGAGGTTTCAGGCACAATTCATCTGTCATCGTATTTGAATGTATCATCTTACAAGACCATTGACGGCCGGGGCCAAAGGATTAAACTCACCGGTAAAGGGTTGCGGCTGAAGGAATGCGAGCATGTAATAGTGTGCAATTTAGAGTTTGAAGGAGGCAGAGGGCCTGATGTTGATGCCATTCAAATCAAGCCTAACTCAAAGCACATATGGATAGATCGTTGTACTCTCAGTGATTTCGAAGATGGGCTGATAGACATCACCAGAGAAAGCACAGATATTACAATTTCAAGGTGTCATTTTTCTAAGCATGACAAAACAATTCTCATTGGAGCAGATCCCTCACATGTTGGTGATAGATGCATAAGGGTCACCATTCATCATTGCTTCTTCGATGGGACTCGACAGAGGCATCCTCGCGTTCGATTTGCAAAAGTTCATCTGTATAACAATTATACCAGAAACTGGGGCATATATGCTGCTTGTGCGAGTGTGGAGTCCCAGATATTCTCGCAACATAATATTTATGAAGCAGGGCAGAAGAAGGTAGCATTCAAGTACCTTTCTGAGAAGGCAGCAGACAAGGGAGCAGAAGCAAGTGGCCGCATAATATCCGAAGGAGATTTGTTTATAAATGGAACACAATCAGGGCTAATAGCATCTAACAATCTTGAATGCAACAATTTTCATCCTAGGGAACACTATCCGGCATGGACGGTGGAACCTCCTTCACATGATCTAAAACAGGTTCTTCAGCATTGCACTGGATGGCAATCTATGGCGAGGCCATTAGACCAAACGGTTGAACACGGTGCACATGATGAAGCAGTACCTATTTATCCATTCCAAACTCACAGCATTGTAGCCAGTTTGCCTTATGCACGAGTGGACTCCTCCCTCCGAGCACTTGCTGGCTCGGCCGAGGGATTTGGACACTCTGCCATTGGTGGCCTCCGTGGTCCCCTTTATCATGTAACAACTCTAGCAGATGATGGACCGGGGTCGCTGCGTGACGCATGTCGCAGAAAAGATCCTTTGTGGATTGTATTTCAAGTTTCAGGCACAATTCATCTGTCTACATTTTTGAGTGTATCATCTTATAAGACCATCGATGGCCGGGGCCGAAGGATTAAACTCACCGGAAAAGGATTGCGGCTGAAGGAATGTGAGCATGTAATAATTTGTAATTTAGAGTTTGAAGGAGGCAGAGGGCCTGATAGTGATGCCATTCAGATCAAGCCTAATTCGAAGCACATATGGATAGATCGTTGCAGCCTCAGTGATTTCGATGATGGACTCATAGACATCACTAGAGAAAGCACGGATATTACCATTTCAAGGTGTCATTTTTCTAAGCACAACAAAACAATTCTCATCGGAGCAGATCCCTCGCATGTTGGGGATAGGTGCATAAGGGTCACCATTCACCACTGCTTTTTCGATGAGACTCGACAGAGGCATCCTCGTGTTAGATTTGCAAACATACATCTTTACAATAATTATAGCAGAAACTGGGGTATATATGCTGTTTGTGCAAGTGTGGAATCACAGGGCAGAAGAAGGTGGCATTTAAGTATCTTTCTGAAAAGGCAGCAGACAAGGGAGAAGAAGCAAGTGGCCGCATAA 1971 0.4515 MGNSHSHRKHRNSLSQNNNSSSSIATPPHYRYGAHHYPKQQHCNRTMVSSKISLPYGRVDTTLRELAAKAEGFGRFAIGGLHGPLYHVTNLAGFFHDGPGSLRDACRRKEPLWIVFEVSGTIHLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIVCNLEFEGGRGPDVDAIQIKPNSKHIWIDRCTLSDFEDGLIDITRESTDITISRCHFSKHDKTILIGADPSHVGDRCIRVTIHHCFFDGTRQRHPRVRFAKVHLYNNYTRNWGIYAACASVESQIFSQHNIYEAGQKKVAFKYLSEKAADKGAEASGRIISEGDLFINGTQSGLIASNNLECNNFHPREHYPAWTVEPPSHDLKQVLQHCTGWQSMARPLDQTVEHGAHDEAVPIYPFQTHSIVASLPYARVDSSLRALAGSAEGFGHSAIGGLRGPLYHVTTLADDGPGSLRDACRRKDPLWIVFQVSGTIHLSTFLSVSSYKTIDGRGRRIKLTGKGLRLKECEHVIICNLEFEGGRGPDSDAIQIKPNSKHIWIDRCSLSDFDDGLIDITRESTDITISRCHFSKHNKTILIGADPSHVGDRCIRVTIHHCFFDETRQRHPRVRFANIHLYNNYSRNWGIYAVCASVESQGRRRWHLSIFLKRQQTREKKQVAA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01519 656 MobiDBLite consensus disorder prediction 1 37 - -
Arst2g01519 656 MobiDBLite consensus disorder prediction 13 27 - -
Arst2g01519 656 SUPERFAMILY Pectin lyase-like 68 376 IPR011050 -
Arst2g01519 656 SUPERFAMILY Pectin lyase-like 419 632 IPR011050 -
Arst2g01519 656 SMART pbh1 531 552 IPR006626 -
Arst2g01519 656 SMART pbh1 607 629 IPR006626 -
Arst2g01519 656 SMART pbh1 504 529 IPR006626 -
Arst2g01519 656 SMART pbh1 206 227 IPR006626 -
Arst2g01519 656 SMART pbh1 182 203 IPR006626 -
Arst2g01519 656 SMART pbh1 555 576 IPR006626 -
Arst2g01519 656 SMART pbh1 155 180 IPR006626 -
Arst2g01519 656 SMART amb_all 448 644 IPR002022 -
Arst2g01519 656 SMART amb_all 99 297 IPR002022 -
Arst2g01519 656 Gene3D - 56 358 IPR012334 -
Arst2g01519 656 Gene3D - 408 646 IPR012334 -
Arst2g01519 656 PRINTS Pollen allergen Amb family signature 69 86 IPR018082 -
Arst2g01519 656 PRINTS Pollen allergen Amb family signature 274 293 IPR018082 -
Arst2g01519 656 PRINTS Pollen allergen Amb family signature 127 143 IPR018082 -
Arst2g01519 656 PANTHER PECTATE LYASE 18-RELATED 39 333 IPR045032 GO:0030570
Arst2g01519 656 Pfam Pectate lyase 477 618 IPR002022 -
Arst2g01519 656 Pfam Pectate lyase 127 290 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01519 Arst-Chr2 29192723 29198725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01519 443 632 Polysaccharide Lyase AT3G55140 80.000 1.54e-111 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01519 K01728 - ecad:122607709 924.465