Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01493 ATGGAAGTTGTGGTGGCTTCCTCCTCCGTGGATGCCGGAATAGGTTGCTGGGATCTACATACGGGGGCAGAGCAGCTCCGCCACAAGTCATGCTCCTCCCCTCCTCATGGCCTCATCTCTGTCGGTGGTCGCTTCCTCGCTTCTTCACATCTCTCTCCACTATCCTCTGGCGGCTCTGTTCTCTTCTGGTCCTGGTCTAAGCCTCAAGTTGGAGTTAGGTGCTTTCCAGCTGAAACTATAAAGCCCCTTTCTGCTAATCATCCAGGCACATATATAGCTGGTGGAGGTGTCTCTGGTGGCATATACCTTTGGGAGGTTGAAACTGGTAGATTACTTAAGAAGTGGAATGCTCATTATAGAGCTGTTACTTGTCTGGTATTTTCTGAAGACGACTCGCTTCTGATTTCTGGTTCGGAAGATGGTTCAGTAAGAGTTTGGTCCCTCTTCATGATATTTGATGATTTGAGAAGTCAAGAAGCAACTCATCTCTATGAGCATAGCTTTACAGGTCATGCCCTACGTGTAACTGATGTTGTGATTGGTTATGGATGTAGCAATGCCATTATAGTGTCGGCATCAGAGGATCGGACCTGTAAGGTGTGGAGCTTGTCCACAGGAGCATTACTAAGAAATATAGTATTCCCTGCAATCATAGATGCCATTGTATTGGATCCTGCTGAGCATGTCTTTTACGCTGGCAGTAGAGATGGAAAAATATTTATTGTTGCACTTCACACTGAGAGCCTTGTTACTAGTAATGATGGGATGCATATCGTTGGTTCATTTTCTAACCACAGCAAGTCAGTTACTTGTTTGGCATATGGCATCAGTGGAAATTTGTTAATATCCGGGTCAGAGGATGGAATGATTCGTGTTTGGAATGCAAGAACTCATAACATTGTCCGCATGTTCAAATATGCTAAAGGGCCTGTAAGTAATATTTGTGTTGTTAGGCCCGAAATAGACTCAACTAGTCATATATTACAATCATCATCAAGAAAGCAGGGGTCCGATTTACCCCCTCCGTTGGAGAAATATGCAAACTCAGTTGAAGATTCAGATGCTAAGACACCTATTGTCCTTTGCGGTGCCAAGAGATGTGCCAAAGTTTCGTATCTCAGTTCTCATGCGATATCTTCTCACGTCAAGGAACTTCAGCGACACGGTTCTGCTGCTGCTTCTGAATTGGAAATGGAGAAACTAAAAGATGATTACCAGAAGTCAATGCAAATGGTTAATCAATGGAAGAAAATGTATGAAAACTTGCATCAATTTTGTGTGAAGGAGCTCTTAGATGGTGGTCAAGCGAGTGTTTCTGATGAAAATAACAAATAA 1335 0.4345 MEVVVASSSVDAGIGCWDLHTGAEQLRHKSCSSPPHGLISVGGRFLASSHLSPLSSGGSVLFWSWSKPQVGVRCFPAETIKPLSANHPGTYIAGGGVSGGIYLWEVETGRLLKKWNAHYRAVTCLVFSEDDSLLISGSEDGSVRVWSLFMIFDDLRSQEATHLYEHSFTGHALRVTDVVIGYGCSNAIIVSASEDRTCKVWSLSTGALLRNIVFPAIIDAIVLDPAEHVFYAGSRDGKIFIVALHTESLVTSNDGMHIVGSFSNHSKSVTCLAYGISGNLLISGSEDGMIRVWNARTHNIVRMFKYAKGPVSNICVVRPEIDSTSHILQSSSRKQGSDLPPPLEKYANSVEDSDAKTPIVLCGAKRCAKVSYLSSHAISSHVKELQRHGSAAASELEMEKLKDDYQKSMQMVNQWKKMYENLHQFCVKELLDGGQASVSDENNK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01493 444 MobiDBLite consensus disorder prediction 327 346 - -
Arst2g01493 444 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 115 148 - -
Arst2g01493 444 Gene3D - 1 215 IPR015943 GO:0005515
Arst2g01493 444 ProSiteProfiles Trp-Asp (WD) repeats profile. 262 303 IPR001680 GO:0005515
Arst2g01493 444 ProSiteProfiles Trp-Asp (WD) repeats profile. 115 148 IPR001680 GO:0005515
Arst2g01493 444 SUPERFAMILY WD40 repeat-like 5 317 IPR036322 GO:0005515
Arst2g01493 444 SMART WD40_4 68 105 IPR001680 GO:0005515
Arst2g01493 444 SMART WD40_4 161 202 IPR001680 GO:0005515
Arst2g01493 444 SMART WD40_4 108 147 IPR001680 GO:0005515
Arst2g01493 444 SMART WD40_4 255 294 IPR001680 GO:0005515
Arst2g01493 444 SMART WD40_4 205 243 IPR001680 GO:0005515
Arst2g01493 444 ProSiteProfiles Trp-Asp (WD) repeats profile. 168 211 IPR001680 GO:0005515
Arst2g01493 444 FunFam Protein ROOT INITIATION DEFECTIVE 3 1 241 - -
Arst2g01493 444 ProSitePatterns Trp-Asp (WD) repeats signature. 281 295 IPR019775 -
Arst2g01493 444 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 262 297 - -
Arst2g01493 444 Gene3D - 216 335 IPR015943 GO:0005515
Arst2g01493 444 PRINTS G protein beta WD-40 repeat signature 281 295 IPR020472 -
Arst2g01493 444 PRINTS G protein beta WD-40 repeat signature 189 203 IPR020472 -
Arst2g01493 444 PRINTS G protein beta WD-40 repeat signature 134 148 IPR020472 -
Arst2g01493 444 Pfam WD domain, G-beta repeat 166 202 IPR001680 GO:0005515
Arst2g01493 444 Pfam WD domain, G-beta repeat 110 147 IPR001680 GO:0005515
Arst2g01493 444 Pfam WD domain, G-beta repeat 259 294 IPR001680 GO:0005515
Arst2g01493 444 Coils Coil 391 418 - -
Arst2g01493 444 PANTHER WD-REPEAT PROTEIN 18 2 431 IPR045227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01493 Arst-Chr2 28300493 28306508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01493 87 306 U-box Gene Family AT1G04510 23.661 1.06e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01493 K14829 - gmx:100791195 672.159