Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst2g01470 | ATGAAAAGACAACGAGATCATCAAGTAATAATGGATAGTAATAGCATTGACTTGGCACAATGTCTAATGCTACTTTCTCATCAAAACCCTAAAGATCAAAGCAAAGTCCACCATTATCATCGTCAGAAACATTTTCGCCCAACGGAATTTGAGTGTAGCACATGCAACCGCAAATTCTCTTCATTTCAAGCCCTTGGTGGTCACAAAGCTAGCCACAAGAAACAAAAGATGGAGAAGAATAACAAAGAAGAAGCCACAACTACTCTCAGCTTAGGAGTAGGGAACAATAATAACGTTTTTATTAACAAACCCAATAAAATGCATGAGTGTTCAATTTGTGGTCAAAGATTCTCTCAAGGGCAAGCACTTGGAGGGCACATGAGAAAGCATAGACTACATGCCAATCAAGAAACGTTTCTAATTCCTTCTATAAACGACGTCGTCCTGGGAAAAATCCCACCAGTTCTAAAGAGATCTAATAGCTTCAGGGTTATGTGTTTGGATTTGAACCTAACACCTCTGCAGAATGATTTAAAGGTATTGTTTGGAAACATGGCACCAAAAGTTGATCCTAGCTGGGTTTGA | 585 | 0.3897 | MKRQRDHQVIMDSNSIDLAQCLMLLSHQNPKDQSKVHHYHRQKHFRPTEFECSTCNRKFSSFQALGGHKASHKKQKMEKNNKEEATTTLSLGVGNNNNVFINKPNKMHECSICGQRFSQGQALGGHMRKHRLHANQETFLIPSINDVVLGKIPPVLKRSNSFRVMCLDLNLTPLQNDLKVLFGNMAPKVDPSWV | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst2g01470 | 194 | SUPERFAMILY | beta-beta-alpha zinc fingers | 105 | 132 | IPR036236 | - | |
Arst2g01470 | 194 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 110 | 130 | IPR013087 | - | |
Arst2g01470 | 194 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 108 | 138 | IPR013087 | - | |
Arst2g01470 | 194 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 50 | 77 | IPR013087 | - | |
Arst2g01470 | 194 | Pfam | C2H2-type zinc finger | 108 | 131 | - | - | |
Arst2g01470 | 194 | Pfam | C2H2-type zinc finger | 50 | 75 | - | - | |
Arst2g01470 | 194 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 11 | 177 | - | - | |
Arst2g01470 | 194 | Gene3D | Classic Zinc Finger | 48 | 130 | - | - | |
Arst2g01470 | 194 | SUPERFAMILY | beta-beta-alpha zinc fingers | 48 | 77 | IPR036236 | - | |
Arst2g01470 | 194 | FunFam | Zinc finger protein | 105 | 131 | - | - | |
Arst2g01470 | 194 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 52 | 72 | IPR013087 | - | |
Arst2g01470 | 194 | SMART | c2h2final6 | 108 | 130 | IPR013087 | - | |
Arst2g01470 | 194 | SMART | c2h2final6 | 50 | 72 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst2g01470 | Arst-Chr2 | 27823464 | 27824222 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst2g01470 | 1 | 194 | C2H2 Transcription Factor Family | AT2G37430 | 44.444 | 3.24e-42 | 138 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Arst2g01470 | zf-C2H2_6 | 4.7e-11 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst2g01470 | - | - | aip:107627118 | 369.392 |