Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01467 ATGGATGGATTGAAATCTCGTGCTCATGTTATCGTTATTGGAGCTACCAATCGCCCAAACAGCATTGACCCAGCATTGAGAAGGTTCGGTAGATTTGATAGGGAAATTGATATTGGTGTTCCTGATGAAGTTGGCCGACTTGAAGTTCTTCGTATACACACTAAAAACATGAAGCTCTCTGATGAT 186 0.414 MDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKACMRKSPVSKDVDLSALAKYTQGFSGADITEICQRACKYAIRENIEKDLERERKRRDNPEAMDEDVDDEVAEIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPETGSRTTGSADPFATSAGGADEDDLYS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01467 471 CDD RecA-like_CDC48_r2-like 154 314 - -
Arst2g01467 471 MobiDBLite consensus disorder prediction 438 471 - -
Arst2g01467 471 Pfam ATPase family associated with various cellular activities (AAA) 183 316 IPR003959 GO:0005524|GO:0016887
Arst2g01467 471 Pfam ATPase family associated with various cellular activities (AAA) 1 39 IPR003959 GO:0005524|GO:0016887
Arst2g01467 471 ProSitePatterns AAA-protein family signature. 10 28 IPR003960 GO:0005524|GO:0016887
Arst2g01467 471 Gene3D - 1 41 IPR027417 -
Arst2g01467 471 Gene3D - 42 132 - -
Arst2g01467 471 FunFam Cell division control 48 41 132 - -
Arst2g01467 471 Gene3D - 320 428 - -
Arst2g01467 471 PANTHER AAA-FAMILY ATPASE 1 434 - -
Arst2g01467 471 SMART AAA_5 179 318 IPR003593 GO:0016887
Arst2g01467 471 Gene3D - 133 316 IPR027417 -
Arst2g01467 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 131 IPR027417 -
Arst2g01467 471 ProSitePatterns AAA-protein family signature. 286 304 IPR003960 GO:0005524|GO:0016887
Arst2g01467 471 FunFam Transitional endoplasmic reticulum ATPase 133 316 - -
Arst2g01467 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 429 IPR027417 -
Arst2g01467 471 FunFam Bromodomain protein 1 40 - -
Arst2g01467 471 Pfam AAA+ lid domain 338 376 IPR041569 -
Arst2g01467 471 Pfam AAA+ lid domain 62 104 IPR041569 -
Arst2g01467 471 MobiDBLite consensus disorder prediction 438 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01467 Arst-Chr2 27466714 27468417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01467 1 97 Calmodulin-binding Proteins AT3G56690 52.041 1.04e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01467 K13525 - qsa:O6P43_010269 880.937