Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01446 ATGGGAGAAGAAGCTCTTTGTGTTCAAGCTTTAGCAGATGGAGAGAAGGAAAACAATGAGGAATTAAGGACGGAACTGAAGAGGAACTACGACCAATGTGATGCTGACACAACTGAGTCTCCTAATAAGAAACAAGCAAAGGAAGTTTCCAATGATGAATTGCGCTCTGAAGTTTTCAACCCGAACATTTCTGTGACTGAGAATGCTTTAGCTTTTCAGGATATTAGTAGCCAGCCCACGGAATCGGGAAATGGTAACCCTGCAGAGTGTGGGGAACTAACGTCCACTTGTTTTGAGAATTCAAGCTCTGATGAGACCTTAAGTGATGAAGCTGGTGATCACAATATCAATAGCACTTTTCGGAGTGATAAGGACCCCAGTAGCTCCGCAATTTCTTCTTGTGTTGTACTGGAGATTCCGAAGCATGTTAGTTCAACTGGGATTAGAAAAATTACTTTTAAGTTCAGTAAGAAGAAGGAGGACTACGATTACCAATCACCTGCTCCAACTTATAGACCTGCTGGCTTTGCTGAAGGCAGTAATCCCTATGGTTTTCATGGGGATGATGAGGAATATATGGCAAGGGCTGATTATAGTGGTGGTTCGTTGGAGAGCCTGGGTGGAATGGGATATGCTCAAAATGGAGATTTCAACTTGTACACTCGCAACATGGAGTTGAAGATGTCGAAAAAGGTAGTCCCCAACTGCTACCCCACAAATGTCAAGAAGCTGTTATCAACTGGTATCCTTGATGGAGCTCTAGTGAAGTATATTTACAACCCGGGAAAGGTTGAATTACCTGGGATTATTGATGGTGGTGGATATTTGTGTGGCTGTTCCATGTGCAATTATTCCAGAGTGCTTAGTGCCTACGAGTTCGAGCAGCATGCTGGTGCCAAGACTAGGCACCCAAATAATCACATATACCTAGAGAATGGAAGACCGATATATAGTATTATCCAAGAAATAAAAACTGCTCCACTCAGCATTCTAGATGAGGTTATAAAAAATGTCGCTGGTTCATCTGTCAACGAGGAGTCCTTTTTAATATGGAAAGAAAGTATTTTACAAAGCAATGAGAGGGCTCAGGGTTATAAGAATTATGGCACCAAGTTTACTGGCATGCCTCATAAGAAGACAAGCCAATCTGTGGAAATTTTGGGTCAGTTGTCTTCTATCCATGTGCCAAGTCATTTTGAGCAACAATTGAATGTGAAGCAGACAACTGACGAGTGGAAACCTGTGGTAAAAAGAAGTGCTGATGGTTGCACTAAAAGAAGGGACAATGATTTACACAGGTTACTCTTTATGCCAAATGGACTACCAGATGGTGCTGAATTGGCTTATTATGTTAAAGGACAGAGAATACTTAGTGGTTACAAACAGGGAAATGGTATAGTCTGTAGTCATTGTGATATAGAGATAAGTCCATCACAATTTGAAGCCCATGCTGGAATGGCTGCGAGACGCCAACCTTACCGACACATATACACCTCCAATGGGTTGACACTTCATGATATAGCTCTGTCTTTGGCAAATGGTCAAAACCTGATGACGGGACATAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGAGATCTGGTTCTTTGCAATCAATGCCCCAGAGCTTTTCATGCAGCATGCTTGGGTTTTGAGTGTGTTCCAGAAACAAGTTGGCGTTGTCTAAATTGTAGAAATAGTGCTGGTAATGGAAGAGAATCTTCTATGATGACATCAAGTATGATACGGTTGACACGGGTTGATAAAGCACCTGAGTTTGAAATGGGAGGATGTGTTGTCTGCAGGGCAAACGATTTCAGTGTGTCTAAGTTTGATGAGCGAACAGTAATAATTTGTGATCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTACGGGAGATAGGGCTTTGTGAGTTGGAAGAACTGCCCAAGGATAAGTGGTTTTGTTGTGATGACTGCAATAGAATATATGTGGCTCTCCAGAATTCAGTTTTTGCTGGACCTGCCATTATACCAGTCTCCTTGTCAGAACTAATAACAAGGAAACATGAGGAAAAGGGACTATTTACCTACGGAGGCATGAATGATATCAAGTGGAGAATCTTAAGTGGAAAAAGCCGTTATCCGGAGCATTTGCCATTACTTTCTCGTGCTGCTGCAATTTTCCGAGAGTGTTTTGATCCCATTGTTGCTACATCTGGACGTGATCTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAATTCGGAGGGATGTATTGCATTGTTCTAATTGTCAATTCTGTTGTTGTATCTGCTGGGCTGCTTAGGATTTTTGGTAGTACTGTTGCTGAACTTCCACTGGTAGCTACTAGCAGAGAACATCAAGGAAAGGGTTATTTCCAAGTGTTATTCTCTTGCATAGAGAGGTTGCTGTCTTCTCTCAATGTAGAAAAGTTGGTGCTTCCTGCAGCTGGGGACGCAGAGTCAATTTGGACTAAAAAACTAGGCTTCAGAAAGATGAGTGAAGATCAGTTATCCAAATATCTTAAGGAGGTGCAGCTAACCCTGTTCAATAAAACTTCAATGCTGGAGAAGAGAGTGCAGCTTGCGATAGAGTGA 2613 0.4206 MGEEALCVQALADGEKENNEELRTELKRNYDQCDADTTESPNKKQAKEVSNDELRSEVFNPNISVTENALAFQDISSQPTESGNGNPAECGELTSTCFENSSSDETLSDEAGDHNINSTFRSDKDPSSSAISSCVVLEIPKHVSSTGIRKITFKFSKKKEDYDYQSPAPTYRPAGFAEGSNPYGFHGDDEEYMARADYSGGSLESLGGMGYAQNGDFNLYTRNMELKMSKKVVPNCYPTNVKKLLSTGILDGALVKYIYNPGKVELPGIIDGGGYLCGCSMCNYSRVLSAYEFEQHAGAKTRHPNNHIYLENGRPIYSIIQEIKTAPLSILDEVIKNVAGSSVNEESFLIWKESILQSNERAQGYKNYGTKFTGMPHKKTSQSVEILGQLSSIHVPSHFEQQLNVKQTTDEWKPVVKRSADGCTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQRILSGYKQGNGIVCSHCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLMTGHSDDMCAVCGDGGDLVLCNQCPRAFHAACLGFECVPETSWRCLNCRNSAGNGRESSMMTSSMIRLTRVDKAPEFEMGGCVVCRANDFSVSKFDERTVIICDQCEKEYHVGCLREIGLCELEELPKDKWFCCDDCNRIYVALQNSVFAGPAIIPVSLSELITRKHEEKGLFTYGGMNDIKWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVATSGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGSTVAELPLVATSREHQGKGYFQVLFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFRKMSEDQLSKYLKEVQLTLFNKTSMLEKRVQLAIE 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01446 870 ProSiteProfiles Zinc finger PHD-type profile. 523 568 IPR019787 -
Arst2g01446 870 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 754 840 IPR016181 -
Arst2g01446 870 SUPERFAMILY FYVE/PHD zinc finger 597 652 IPR011011 -
Arst2g01446 870 SUPERFAMILY FYVE/PHD zinc finger 521 570 IPR011011 -
Arst2g01446 870 FunFam PHD zinc finger protein 597 657 - -
Arst2g01446 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 595 657 IPR013083 -
Arst2g01446 870 Coils Coil 12 32 - -
Arst2g01446 870 PANTHER AUTOIMMUNE REGULATOR 15 864 - -
Arst2g01446 870 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 698 857 IPR000182 GO:0016747
Arst2g01446 870 Pfam Tify domain binding domain 459 508 IPR032308 -
Arst2g01446 870 Pfam Tify domain binding domain 268 322 IPR032308 -
Arst2g01446 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 514 591 IPR013083 -
Arst2g01446 870 MobiDBLite consensus disorder prediction 76 105 - -
Arst2g01446 870 CDD NAT_SF 758 819 - -
Arst2g01446 870 Gene3D - 696 864 - -
Arst2g01446 870 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 513 591 - -
Arst2g01446 870 MobiDBLite consensus disorder prediction 14 54 - -
Arst2g01446 870 MobiDBLite consensus disorder prediction 76 125 - -
Arst2g01446 870 Pfam PHD-finger 525 567 IPR019787 -
Arst2g01446 870 ProSitePatterns Zinc finger PHD-type signature. 599 654 IPR019786 -
Arst2g01446 870 SMART PHD_3 598 655 IPR001965 -
Arst2g01446 870 SMART PHD_3 525 566 IPR001965 -
Arst2g01446 870 FunFam PHD finger family protein 697 864 - -
Arst2g01446 870 MobiDBLite consensus disorder prediction 1 57 - -
Arst2g01446 870 ProSitePatterns Zinc finger PHD-type signature. 526 565 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01446 Arst-Chr2 25440874 25448953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01446 1 865 PHD Transcription Factor Family AT3G53680 52.121 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst2g01446 TDBD 9.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01446 - - gmx:100808999 1456.43