Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01395 ATGGTTTCTTTTGGAAGTTGTAGTATTTATAGAAGAACAGAGAATCGTTTTCTTATGTGTTCAATTCTCAAATTTCATAGCATATACGGTTCCTTTAAATTCTTTCATTCTAAACTTAACCGGGGTTCCAGTGCTTCAGATAAAACCCCCAAACTGGAACCAAATAGGAATAATCACAATAGGGTAGGGATTTTCTGGGACTTAGATAACAAGCCACCAAACCCAATTCCACCTTATGAAGTTGCCAATAAGCTTAGAATTGTTGCATCTTCATTTGGGGTTGTTAGGCATATGGTAGCTTATGCAAATAGCCACACTTTCAGCAGTGTCCCACACGCTGTCCGGCAGAGGAGGAAAGAGAAGGAGCTGTATAATCGACTGGAGAGCAAGGGCGTCATCAAGCGGAATGAGCCTCATGTTTGCAGGGTTTGTGGGAGAAAGTTCTACACTAATGAGAAGCTTGTTAACCATTTCAAGCAGCTACATGAGAGCGAGCAAACAAAAAGGGTAAACCAAATAGCGTCTGCAAGGGGGAGCCGGAGGGTGAAGTTGGTGGCGAAGTATTCGATGAAGATGGAGAAATATAAGAAGGCTGCAAGGGATATTCTTACTCCAAGAGTAGGGTATGGTTTGGCGGATGAGCTGAAACGCGCAGGATTTTGGGTTCAGACCGTGTTGGATAAGCCAGAGGCTGCGGATCATGCATTGGAAAGTCACATGGTTGATATGATGGATCATAGGAGGGTTGAGTGCATAGTACTTGTGTCTGATGATTATGATTTCGCTAATGTAATAAGGGAAGCGAAGCTACGATGTCTGAAGACAGTTGTCGTTGGGGATACTAGTGATGGTGTATTGAAGAGGATTGCTGATACGTCCTTTTCTTGGGAGGAAATCCTAATGGGGAAAGCTAAAAAGGAGGCTGTATCAGTTGTCGAGAATTGGAAGGATCGTGATATTTTGAAAAGGTTAGAGTGGACATACAATCCAGAGGTGGATAAAAAGAAATACGATCCGGCTGATGTGGTTATTGAAGAATCAGAAGATGAGAATATTGAAGATATTTGTGATAATGTTGATGATGACTATAAGGATGGTGGAGGTGCTTGGTGGGAGTTAGATTCAGATGAAAATGTCACAAATGAACAGACACCAAAAGTATAG 1164 0.4201 MVSFGSCSIYRRTENRFLMCSILKFHSIYGSFKFFHSKLNRGSSASDKTPKLEPNRNNHNRVGIFWDLDNKPPNPIPPYEVANKLRIVASSFGVVRHMVAYANSHTFSSVPHAVRQRRKEKELYNRLESKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHESEQTKRVNQIASARGSRRVKLVAKYSMKMEKYKKAARDILTPRVGYGLADELKRAGFWVQTVLDKPEAADHALESHMVDMMDHRRVECIVLVSDDYDFANVIREAKLRCLKTVVVGDTSDGVLKRIADTSFSWEEILMGKAKKEAVSVVENWKDRDILKRLEWTYNPEVDKKKYDPADVVIEESEDENIEDICDNVDDDYKDGGGAWWELDSDENVTNEQTPKV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01395 387 ProSitePatterns Zinc finger C2H2 type domain signature. 141 162 IPR013087 -
Arst2g01395 387 Pfam NYN domain 211 292 IPR021139 GO:0004540
Arst2g01395 387 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 44 381 - -
Arst2g01395 387 Gene3D - 54 300 - -
Arst2g01395 387 ProSiteProfiles Zinc finger C2H2 type domain profile. 139 167 IPR013087 -
Arst2g01395 387 CDD PIN_LabA-like 149 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01395 Arst-Chr2 22294623 22296537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01395 43 384 C2H2 Transcription Factor Family AT4G12240 55.398 8.60e-140 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst2g01395 NYN 1e-06 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01395 - - lja:Lj3g3v3326020.1 537.339