Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01378 ATGGGGATTCAGTTCTCCAGCCTCGTGCCGTGCTGCGTAAATTCACAAGTTAAGACATCTGTTATTGAAGTTCCGCATACTGGAAATGAAGATAGAAGTGAAGCCGATAATGGGCCTGCATTTCGCGAATATACATTTGAGCAACTTAAGAATGCGACATCCGGTTTCTCTGTTCAGAATATAGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTGTATAAAGGGAAGTTGGAGAATCAAATGAGGATTGCTGTTAAGAGGTTCAATAGGAATGCTTGGCCCGATTCTCGGCAGTTTTTGGAGGAAGCTAGATCTGTTGGCCAGCTTCGTCACCAAAGATTAGCGAATTTACTTGGTTGTTGTTGTGAAGGCGAAGAGAGGTTGCTTGTAGCCGAATACATGCCCAACGAAACACTCGCAAAACACCTTTTCCATTGTAATAGCTTGTTTCATGCATATGATTTGTTCTTCTCTTTTAATAATTGGAAAACCAATTGTTCATCTTGCTTGGAAGGACAGTTTTCTGATGATGATGGAACCGAGTTGGTGCGCTGGGCATCTCGATGTTTACAGTACGAACCAAGAGAGAGGCCTAATCCGAAGTCATTAGTGGCTGCTTTGGCCCCTCTTCAGAAAGAGACAGAGGTTCCTTCACATGAATTGATGGGTATCCCGCATGGTTCTACTTTAGCTTCATTGTCTCCGCTCGATGAAGCTTGTTCAAGAAAGGACCTGACTGCCATTCATGAAGTTTTGGAAAAACTTGGCTATAAAGATGATGAGGGAATTGCAAATGAGTTATCTTTCCAGATGTGGACTGATCAAATGCAGGACATGCTAAATTGTAAGAAAAAAGGCGATGCGGCTTTCCGGCAGAAAGATTTTAGACTTGCAATTGAGTTCTATACACAGTTCATTGATGCCGGAACAATGGTTTCTCCAACGGTACATGCGCGTCGCAGTTTGTGTTATCTCATGAGCGAAATGCCGCAGGAAGCACTAGGCGATGCAATGCAAGCGCAAGTGATTTCCCCTTTGTGGCACATTGCATCTTATCTTCAGTATGTTTCATTGGGTGGACTTGGAATGGAGCATGAAGCACAAGTAGCACTCAAAGAGGGAACAACATTGGAAGCCAAAAGGAGTGGACAAAAATGA 1161 0.4332 MGIQFSSLVPCCVNSQVKTSVIEVPHTGNEDRSEADNGPAFREYTFEQLKNATSGFSVQNIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDSRQFLEEARSVGQLRHQRLANLLGCCCEGEERLLVAEYMPNETLAKHLFHCNSLFHAYDLFFSFNNWKTNCSSCLEGQFSDDDGTELVRWASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHELMGIPHGSTLASLSPLDEACSRKDLTAIHEVLEKLGYKDDEGIANELSFQMWTDQMQDMLNCKKKGDAAFRQKDFRLAIEFYTQFIDAGTMVSPTVHARRSLCYLMSEMPQEALGDAMQAQVISPLWHIASYLQYVSLGGLGMEHEAQVALKEGTTLEAKRSGQK 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01378 386 Gene3D Tetratricopeptide repeat domain 278 386 IPR011990 GO:0005515
Arst2g01378 386 SUPERFAMILY Protein kinase-like (PK-like) 38 153 IPR011009 -
Arst2g01378 386 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Arst2g01378 386 Pfam Protein tyrosine and serine/threonine kinase 72 146 IPR001245 GO:0004672|GO:0006468
Arst2g01378 386 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 152 383 IPR045845 GO:0004672|GO:0009742
Arst2g01378 386 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Arst2g01378 386 SUPERFAMILY TPR-like 279 378 IPR011990 GO:0005515
Arst2g01378 386 FunFam probable serine/threonine-protein kinase At4g35230 278 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01378 Arst-Chr2 21590894 21594577 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01378 25 171 Receptor kinase-like Gene Family AT1G56120 35.374 1.54e-18 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Arst2g01378 PK_Tyr_Ser-Thr 3.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01378 K14500 - gmx:100781311 378.252