Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01368 ATGGGGATTCAGTTCTCCAGCCTCGTGCCGTGCTGCGTAAATTCACAAGTTAAGACATCTGTTATTGAAGTTCCGCATACTGGAAATGAAGATAGAAGTGAAGTCGATAATGGGCTTGCATTTCGCGAATATACATTTGAGCAACTTAAGAATGCGACATCCGGTTTCTCTGTTCAGAATATAGTATCTGAACATGGAGAGAAGGCTCCAAATGTTGTGTATAAAGGGAAGTTGGAGAATCAAATGAGGATTGCTGTTAAGAGGTTCAATAGGAATGCTTGGCCCGATTCTCGGCAGTTTTTGGTAAATGAAGCTAGATCTGTTGGCCAGCTTCGTCACCAAAGATTAGCGAATTTACTTGGTTGTTGTTGTGAAGGCGAAGAGAGGTTGCTTGTGGCCGAATACATGCCCAACGAAACACTCGCAAAACACCTTTTCCATTGGGAAACTCAACCGATAAAATGGCCAATGCGACTGAGAGTTGTTCTACATCTTGCAGAAGCTCTGGAATACTGCACGAGCAAAGGACATGCGCTCTATCATGACCTTAACGCATATAGAGTTCTATTTGACGAGGATGGTAATCCTAGGCTTTCAACTTTTGGCCTTATGAAGAATAGTAGGGATGGAAAAAGTTATAGCACGAATTTAGCATTTACCCCTCCTGAGTATCTCAGAACTGGTAGAGTAACACCAAAAAGTGTAATATATAGCTTTGGAACTCTTTTGCTTGACATTCTGAGTGGGAAGCATATCCCTCCAAGTCATGCTCTTGATTTGATTCGAGACAGAAATCTTCGGATGCTGACGGATTCTTGCTTGGAAGGACAGTTTTCTGATGATGATGGAACCGAGTTGGTGCGCTGGGCATCTCGATGTTTACAGTACGAACCAAGAGAGAGGCCTAATCGGAAGTCATTAGTGGCTGCTTTGGCCCCTCTTCAGAAAGAGACAGAGGTTCCTTCACATGAATTGATGGGTATTCCGCATGGTTCTACTTTAGCTTCATTGTCTCCGCTCGGTGAAGCTTGTTCAAGAAAGGACCTGACTGCCATTCATGAAGTTTTGGAAAAACTTGGCTATAAAGATGATGAGGGAATTGCAAATGAGTTATCTTTCCAGATGTGGACTGATCAAATACAGGACATGCTAAATTGTAAGAAAAAAGGCGATGCGGCTTTCTGGCAGAAAGATTTTAGACTTGCAATTGAGTTTTATACACAGTTCATTGATGCCGGAACAATGGTTTCTCCAACGGTACATGCGCGTCGCAGTTTGTGTTATCTCATGAGCGAAATGCCGCAGGAAGCGCTAGGCGATGCAATGCAAGCGCAAGTGATTTCCCCTTTGTGGCACATTGCATCTTATCTTCAGTATGTTTCATTGGGTGGACTTGGAATGGAGCATGAAGCATAA 1416 0.4322 MGIQFSSLVPCCVNSQVKTSVIEVPHTGNEDRSEVDNGLAFREYTFEQLKNATSGFSVQNIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDSRQFLVNEARSVGQLRHQRLANLLGCCCEGEERLLVAEYMPNETLAKHLFHWETQPIKWPMRLRVVLHLAEALEYCTSKGHALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPKSVIYSFGTLLLDILSGKHIPPSHALDLIRDRNLRMLTDSCLEGQFSDDDGTELVRWASRCLQYEPRERPNRKSLVAALAPLQKETEVPSHELMGIPHGSTLASLSPLGEACSRKDLTAIHEVLEKLGYKDDEGIANELSFQMWTDQIQDMLNCKKKGDAAFWQKDFRLAIEFYTQFIDAGTMVSPTVHARRSLCYLMSEMPQEALGDAMQAQVISPLWHIASYLQYVSLGGLGMEHEA 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01368 471 Gene3D Phosphorylase Kinase; domain 1 30 135 - -
Arst2g01368 471 FunFam probable serine/threonine-protein kinase At5g41260 137 328 - -
Arst2g01368 471 Gene3D Transferase(Phosphotransferase) domain 1 137 329 - -
Arst2g01368 471 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Arst2g01368 471 FunFam probable serine/threonine-protein kinase At4g35230 31 135 - -
Arst2g01368 471 Gene3D Tetratricopeptide repeat domain 372 471 IPR011990 GO:0005515
Arst2g01368 471 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 25 471 IPR045845 GO:0004672|GO:0009742
Arst2g01368 471 SUPERFAMILY Protein kinase-like (PK-like) 38 319 IPR011009 -
Arst2g01368 471 SUPERFAMILY TPR-like 382 470 IPR011990 GO:0005515
Arst2g01368 471 ProSiteProfiles Protein kinase domain profile. 59 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01368 Arst-Chr2 21520755 21528127 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01368 10 314 Glycoside Hydrolase AT3G07070 33.841 3.17e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Arst2g01368 PK_Tyr_Ser-Thr 2.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01368 K14500 - gmx:100799260 827.009