Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01333 ATGGCGCTATGGATGGAAAACGGTTCAGAGCCACTAACAGAAGCCGAGAAGGCAGACCTTGAAGCCATTGCTGCCATCAAAGAATCCGCAGCCATTGAACTCAAGGAAAAGGGTAACGAGTATGTGAAGAAGGGTAAGAAGCATTACTCTGAAGCAATTGATTGCTACACAAGGGCGATTAATCAGAAAGCATTGAGTGATTCTGAGAGCTCTGTTCTTTTTGCGAACAGAGCGCATGTCAATTTGCTTCTTGGGAACCATAGGCGTGCCCTCACTGATGCTCAACAAGCACTCAACTTGTCCCCTTCCAACATAAAGGCAATTTATAGGGCTGTCAAAGCATCTCTATCACTGAATTTATTGGCTGAAGCACAAGACTTCTGCCGAAAGGGTCTTGAGTTGGACCCCAATAATGAGGAATTTAAGAGGCTTGACCAACAGATTCGTACGAAGATATCGGAGAAGGAGAAGCGTGAGGCTGAAGTCTCCAAAGCCATATTGGAGGCAAAAGAACTTGTGTCTGCAATAGAAAATAGAGGCTTGAAGATTGGAAAGGCAATATATCGAGAACTCACCGGGTTAAAGAAACCGGTGTTAGACAAAAATAATATCCTTCATTGGCCTGTCCTTCTTCTTTATGCAGAGGTTATGTCCAGTGATTTCATTGAGGATTTCTGTGAGACTGACATGCTTTCAGTCCACCTTGATATGATGTTTTCAGCAGACCAACCACTCCCATGGGATGTTGAAAACAATTACAAACGTGATTTTGTTGAATTATACTATGAGGCTGGCTCTGGAGTTCGTCTATCAAAGGAGAAACTTCTTCATTGTTTATTAGAGGGAACTGCAGCTTCTCATGTTGGTGATGAAGAGAAAGATGCAGTTGAGGATTTTAAACACAGTGCAGGTTCCCCAAAATGGATCAAAGTAAATGAGAAGAAAATGCTCCAAGATATCCTCAAAGAACCTAATTTCGTAATCCCAGAAATCCCAGCTTTTATAGCAAGTTCAAATCTGGAAAATGGGCTCCTCCAAGCATATGAAAGCAAAGCAACAAAGGAAGGGCTTCAAGGTAGCTATTAG 1086 0.4236 MALWMENGSEPLTEAEKADLEAIAAIKESAAIELKEKGNEYVKKGKKHYSEAIDCYTRAINQKALSDSESSVLFANRAHVNLLLGNHRRALTDAQQALNLSPSNIKAIYRAVKASLSLNLLAEAQDFCRKGLELDPNNEEFKRLDQQIRTKISEKEKREAEVSKAILEAKELVSAIENRGLKIGKAIYRELTGLKKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMLSVHLDMMFSADQPLPWDVENNYKRDFVELYYEAGSGVRLSKEKLLHCLLEGTAASHVGDEEKDAVEDFKHSAGSPKWIKVNEKKMLQDILKEPNFVIPEIPAFIASSNLENGLLQAYESKATKEGLQGSY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01333 361 SMART tpr_5 105 138 IPR019734 GO:0005515
Arst2g01333 361 SMART tpr_5 31 66 IPR019734 GO:0005515
Arst2g01333 361 SMART tpr_5 71 104 IPR019734 GO:0005515
Arst2g01333 361 Pfam Cns1/TTC4 Wheel domain 200 267 IPR044059 GO:0051879
Arst2g01333 361 CDD CTWD_Cns1-like 170 334 - -
Arst2g01333 361 Pfam Tetratricopeptide repeat 106 138 IPR019734 GO:0005515
Arst2g01333 361 Gene3D Tetratricopeptide repeat domain 27 173 IPR011990 GO:0005515
Arst2g01333 361 SUPERFAMILY TPR-like 22 162 IPR011990 GO:0005515
Arst2g01333 361 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Arst2g01333 361 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01333 Arst-Chr2 20485521 20490071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01333 30 160 Calmodulin-binding Proteins AT3G25230 33.099 1.86e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01333 K24927 - gmx:100783179 537.339