Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01331 ATGAATTTGGATCTTCTAAATTTTGGGTTTTCACTTGAGAGGATAAAGTTGATCCACTGGTTGAACCAGTGAGCCATGACCGGGTCAATTACCAGTTTAGTTCTGATAACTATGCGAATCGGAACTATCATTCACAATATTGAATTGAACCCAGGGCAAGGTGGCAAGCTGGTTAGAGCTGCTGGAACTTGTGCAAAAATCCTGAAAGAACCTACATCAAAATACTGTCTTATCCAGCTCCCCTCGGGTGTTAAAAAAATGATTGATTCTCGTTGCAGAGCCACCGTTGGTACTGTCTCAAATCCAAGCCATGGAGATAAGAAGCTTAGGAAGGCTGGACAAAGCCGGTGGCTTGGCCGGAGACCAGTTGTTCGAGGAGTGGCCATGAATCCAGTGGACCATCCTCATGGTGGAGGAGAGGGCAAGAGCAAGAGTAGTGGTCGGTGGGGAAAAGGATCTCGAACTCCTTGGGGTAAGCCGACTAAGAGTGGATTCAAGACCGGGCCCCTGAAACGGAGGAAGTAG 525 0.4762 MNLDLLNFGFSLERIKLIHWLNQXAMTGSITSLVLITMRIGTIIHNIELNPGQGGKLVRAAGTCAKILKEPTSKYCLIQLPSGVKKMIDSRCRATVGTVSNPSHGDKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGKGSRTPWGKPTKSGFKTGPLKRRK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01331 174 FunFam 50S ribosomal protein L2 100 174 - -
Arst2g01331 174 ProSitePatterns Ribosomal protein L2 signature. 122 133 IPR022671 GO:0003735|GO:0005840|GO:0006412
Arst2g01331 174 SUPERFAMILY Translation proteins SH3-like domain 33 163 IPR008991 -
Arst2g01331 174 Gene3D - 24 100 IPR014722 -
Arst2g01331 174 FunFam 60S ribosomal protein L2, mitochondrial 22 99 - -
Arst2g01331 174 Pfam Ribosomal Proteins L2, C-terminal domain 33 158 IPR022669 GO:0003735|GO:0005840|GO:0006412
Arst2g01331 174 SMART Ribosomal_L2_C_2 25 160 IPR022669 GO:0003735|GO:0005840|GO:0006412
Arst2g01331 174 MobiDBLite consensus disorder prediction 127 174 - -
Arst2g01331 174 PANTHER RIBOSOMAL PROTEIN L2 37 172 IPR002171 GO:0003735|GO:0005840|GO:0006412
Arst2g01331 174 Gene3D Ribosomal protein L2, domain 3 101 174 IPR014726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01331 Arst-Chr2 20483053 20484043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01331 26 139 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 44.167 1.30e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01331 - - adu:107473921 338.576