Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01271 ATGACAAGTCTGCATCAGGCATCAATAGCTGAAAGCAATTTGCAAATAATGGAAGCCCGTCCTTCTATATCCATTGAAAGATCAAGTGCGGAGAAACACAATGTCATGGGGATGTCTGGAGCACTATCTTCATCCTTGGCAGTCCTTCCAACACCCCTAGAAGAGACATATAATAAGTTGCCTGATTCACCTCTTGCTTTTGTAGAAGAAGGGCTGATGAGTGGACCTTTAACTCATTCTGGTCATTTAAATAACAACGGAGCAGTTGGACATATCTTTTCATCTTCTCCTGGATATTCAACTGCTCTTCACCATTCATCCCTTTCACCTCATGAAAAGCATTCTAGAAATGCTCACATTATTTCACATTCATCAACTAATATGGCTACATTGCCACCATTTTCTTCAAATAGTGGACCACTACCTTCCAAACCATCAAGGCATTTTCCTAATGAAAACAGTGCCTCCTGGCATACTGATTCTGTGCCAAGCTTTCTGGATTTTCCCGCAAATACTTCCATCGATAGTGGTAGGGTAGAAAGTGGTGCCTGCACTATCATGGCATCTGAGGAATATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTAACTTCTAATTTGAATGATCTTCTTGCTGATAATGTTCCAGATCCTGAGCCAAAGGTTTCAAAACCATCTTTGCAATTACCAGGGCATCCATCCGAAGGCCATCAACAACTTCCTGCTTCATCTGAAGAAAATTGCGCTGGTGCTGCCCCTTCTTCCTCAGCAAAATCTGCTCCTTCCAAGCCACGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTCGTGGATGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGCTTAACTATATATCATGTCAAAAGCCACTTGCAGAAATACAGGACAGCTAGATATAGACCCGACTCGTCTGAAGGAGTCTCAGAGAAAAAAACAAGTTCCATTGAAGAGATGGCATCACTAGATTTGAGAACTGGCATTGATATCACTGAAGCTCTGCGACTGCAAATGGTGGTTCAGAAGCAGTTGCATGAACAACTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTATCTCCAGATGATGTTTGAGAAGCAATGTAAACCCGAGACTGAAATGTTTAAGGCATCATTATCTACTGCTGAAAATCCATCTGGATCCTCTTTGGATGCCATGCAAGATGTTCCAGCCAAAAGCGCATCAATGGTGGACAATTACAAGCCAGGACCTGATCAAGCTATCGGCAGCACCAAGGTTGTGGAAGGCTCAGTGGAAATAGGGGGGAAACATGATTCTCCCAAAACACAACTTTCTGAGAATCCTAAGCAGCATGCTAATGCTAACGATGATGCTGCTCAAGCCTCGAAGCGTCAAAGAAAAGATGAGTAA 1494 0.4311 MTSLHQASIAESNLQIMEARPSISIERSSAEKHNVMGMSGALSSSLAVLPTPLEETYNKLPDSPLAFVEEGLMSGPLTHSGHLNNNGAVGHIFSSSPGYSTALHHSSLSPHEKHSRNAHIISHSSTNMATLPPFSSNSGPLPSKPSRHFPNENSASWHTDSVPSFLDFPANTSIDSGRVESGACTIMASEEYCKQNDWQEWADQLISDDDTLTSNLNDLLADNVPDPEPKVSKPSLQLPGHPSEGHQQLPASSEENCAGAAPSSSAKSAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPDSSEGVSEKKTSSIEEMASLDLRTGIDITEALRLQMVVQKQLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPETEMFKASLSTAENPSGSSLDAMQDVPAKSASMVDNYKPGPDQAIGSTKVVEGSVEIGGKHDSPKTQLSENPKQHANANDDAAQASKRQRKDE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01271 497 Pfam MYB-CC type transfactor, LHEQLE motif 358 403 IPR025756 -
Arst2g01271 497 MobiDBLite consensus disorder prediction 473 487 - -
Arst2g01271 497 MobiDBLite consensus disorder prediction 246 271 - -
Arst2g01271 497 SUPERFAMILY Homeodomain-like 270 326 IPR009057 -
Arst2g01271 497 MobiDBLite consensus disorder prediction 217 275 - -
Arst2g01271 497 MobiDBLite consensus disorder prediction 434 497 - -
Arst2g01271 497 NCBIfam myb-like DNA-binding domain, SHAQKYF class 272 326 IPR006447 GO:0003677
Arst2g01271 497 Gene3D - 271 330 - -
Arst2g01271 497 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 269 329 IPR017930 -
Arst2g01271 497 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 249 474 IPR044848 GO:0003700
Arst2g01271 497 FunFam Myb family transcription factor 271 329 - -
Arst2g01271 497 Pfam Myb-like DNA-binding domain 274 325 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01271 Arst-Chr2 17345630 17350570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01271 17 401 G2-like Transcription Factor Family AT4G28610 48.985 4.84e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst2g01271 Myb_DNA-binding 1.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01271 - - aip:107624999 934.095