Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01270 ATGACAAGTCTGCATCAGGCATCAATAGCTGAAAGCAATTTGCAAATAATGGAAGCCCGTCCTTCTATATCCATTGAAAGATCAAGTGCGGAGAAACACAATGTCATGGGGATGTCTGGAGCACTATCTTCATCCTTGGCAGTCCTTCCAACACCCCTAGAAGAGACATATAATAAGTTGCCTGATTCACCTCTTGCTTTTGTAGAAGAAGGGCTGATGAGTGGACCTTTAACTCATTCTGGTCATTTAAATAACAACGGAGCAGTTGGACATATCTTTTCATCTTCTCCTGGATATTCAACTGCTCTTCACCATTCATCCCTTTCACCTCATGAAAAGCATTCTAGAAATGCTCACATTATTTCACATTCATCAACTAATATGGCTACATTGCCACCATTTTCTTCAAATAGTGGACCACTACCTTCCAAACCATCAAGGCATTTTCCTAATGAAAACAGTGCCTCCTGGCATACTGATTCTGTGCCAAGCTTTCTGGATTTTCCCGCAAATACTTCCATCGATAGTGGTAGGGTAGAAAGTGGTGCCTGCACTATCATGGCATCTGAGGAATATTGTAAGCAAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATACTTTAACTTCTAATTTGAATGATCTTCTTGCTGATAATGTTCCAGATCCTGAGCCAAAGGAGCCATTCCAGGTTTCAAAACCATCTTTGCAATTACCAGGGCATCCATCCGAAGGCCATCAACAACTTCCTGCTTCATCTGAAGAAAATTGCGCTGGTGCTGCCCCTTCTTCCTCAGCAAAATCTGCTCCTTCCAAGCCACGAATGCGTTGGACTCCAGAACTTCATGAGGCCTTCGTGGATGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGCTTAACTATATATCATGTCAAAAGCCACTTGCAGAAATACAGGACAGCTAGATATAGACCCGACTCGTCTGAAGGAGTCTCAGAGAAAAAAACAAGTTCCATTGAAGAGATGGCATCACTAGATTTGAGAACTGGCATTGATATCACTGAAGCTCTGCGACTGCAAATGGTGGTTCAGAAGCAGTTGCATGAACAACTTGAGATTCAAAGAAATCTACAGTTGCGAATAGAAGAACAAGGAAGGTATCTCCAGATGATGTTTGAGAAGCAATGTAAACCCGAGACTGAAATGTTTAAGGCATCATTATCTACTGCTGAAAATCCATCTGGATCCTCTTTGGATGCCATGCAAGATGTTCCAGCCAAAAGCGCATCAATGGTGGACAATTACAAGCCAGGACCTGATCAAGCTATCGGCAGCACCAAGGTTGTGGAAGGCTCAGTGGAAATAGGGGGGAAACATGATTCTCCCAAAACACAACTTTCTGAGAATCCTAAGCAGCATGCTAATGCTAACGATGATGCTGCTCAAGCCTCGAAGCGTCAAAGAAAAGATGAGTAA 1506 0.4323 MTSLHQASIAESNLQIMEARPSISIERSSAEKHNVMGMSGALSSSLAVLPTPLEETYNKLPDSPLAFVEEGLMSGPLTHSGHLNNNGAVGHIFSSSPGYSTALHHSSLSPHEKHSRNAHIISHSSTNMATLPPFSSNSGPLPSKPSRHFPNENSASWHTDSVPSFLDFPANTSIDSGRVESGACTIMASEEYCKQNDWQEWADQLISDDDTLTSNLNDLLADNVPDPEPKEPFQVSKPSLQLPGHPSEGHQQLPASSEENCAGAAPSSSAKSAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPDSSEGVSEKKTSSIEEMASLDLRTGIDITEALRLQMVVQKQLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPETEMFKASLSTAENPSGSSLDAMQDVPAKSASMVDNYKPGPDQAIGSTKVVEGSVEIGGKHDSPKTQLSENPKQHANANDDAAQASKRQRKDE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01270 501 Pfam Myb-like DNA-binding domain 278 329 IPR001005 -
Arst2g01270 501 Gene3D - 275 334 - -
Arst2g01270 501 MobiDBLite consensus disorder prediction 477 491 - -
Arst2g01270 501 SUPERFAMILY Homeodomain-like 274 330 IPR009057 -
Arst2g01270 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 273 333 IPR017930 -
Arst2g01270 501 MobiDBLite consensus disorder prediction 250 275 - -
Arst2g01270 501 FunFam Myb family transcription factor 275 333 - -
Arst2g01270 501 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 253 478 IPR044848 GO:0003700
Arst2g01270 501 MobiDBLite consensus disorder prediction 438 501 - -
Arst2g01270 501 Pfam MYB-CC type transfactor, LHEQLE motif 362 407 IPR025756 -
Arst2g01270 501 NCBIfam myb-like DNA-binding domain, SHAQKYF class 276 330 IPR006447 GO:0003677
Arst2g01270 501 MobiDBLite consensus disorder prediction 217 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01270 Arst-Chr2 17345630 17350570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01270 17 405 G2-like Transcription Factor Family AT4G28610 48.492 3.16e-97 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst2g01270 Myb_DNA-binding 1.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01270 - - aip:107624999 948.732