Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01223 ATGCTTCTCCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGTGTTGAGGGAGACTACAATGTCATGGTTATTGACCTCCTCGGTCCAAGTCTAGAAGATTTGTTTAATTATTGCAACCGTAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTCGAATATATGCATTCAAGAGGTTTTCTTCACCGGGACATAAAGCCAGACAATTTTTTAATGGGCTTAGGCCGCAAAGCAAATCAGGTATACATTATTGACTATGGCCTTGCGAAAAAGTATAGGGATCTTCAAACTCATAGACACATACCATACAGGGAAAACAAGAATCTTACTGGTACAGCACGCTATGCAAGTGTCAACACACATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGGGGAAGTCTTCCCTGGCAGGGACTTAAGGCTGGCAACAAAAAACAAAAATATGATAGAATCAGTGAGAAGAAAGTATCAACTCCCATAGAGGTGCTCTGCAAATCATATCCTGCTGAGTTTGTATCATACTTCCATTACTGCCGTTCTTTGCGGTTTGAAGACAAGCCAGATTATTCATATCTAAAGAGACTTTTCCGTGACCTGTTTATTCGAGAAGGCCATCAATTCGACTATGTTTTTGACTGGACTGTACTGAAGTATCCACATGTTGGCGACAGCAGCTCTAGAGGGCGGAATGGTGCCGGCAAGGCAGCTATGAATGCTGGGCCAACTGCATACAAACCTGAAAAGATCTCAGTTGGAAGAGATAGCCGAGAGCAATACGATGTATACGACCGGAGGAACCAAATGACTAGCCCTCCTGTTGATCACATGAGATACAGAAGTTCTGACGATGTAGCAATACACAGGGATATGCACCATGATGAATATGACGAATACAATACAACTCGTTATGCGAGCACTTCAAGAAGGGCTATAGTCACATCAAATAAGCATGTTTCCTCAGGCGACTATGGTTATGCTGGGATGACTCCGAGTAGGGGCTACGGTGGGATGACCCCAAGTAGAGGCTACGGTAACCCTGGCATGACCCCAAGTAGGGGTCATCCCACCGGTCATGCCGGTAACCCTGGCATGACCCCAAGCAGGGCCTTTCCTGTTCATCCAGGCATGACCCCGAGCAGGGGCCATCCAACCACCACACATCGGATTCAACCTATTTATGAGACCAAACCAGCAACTTTTACTCGCAATGGATCTACAAGACGCCAGCGTGATGAAACTCTAAGGAACTTCGAGCACCTTAATATCAGGAAGTAA 1338 0.4507 MLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKVSTPIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGHQFDYVFDWTVLKYPHVGDSSSRGRNGAGKAAMNAGPTAYKPEKISVGRDSREQYDVYDRRNQMTSPPVDHMRYRSSDDVAIHRDMHHDEYDEYNTTRYASTSRRAIVTSNKHVSSGDYGYAGMTPSRGYGGMTPSRGYGNPGMTPSRGHPTGHAGNPGMTPSRAFPVHPGMTPSRGHPTTTHRIQPIYETKPATFTRNGSTRRQRDETLRNFEHLNIRK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01223 445 Gene3D Transferase(Phosphotransferase) domain 1 3 279 - -
Arst2g01223 445 MobiDBLite consensus disorder prediction 362 387 - -
Arst2g01223 445 FunFam CK1 family protein kinase 1 268 - -
Arst2g01223 445 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01223 445 MobiDBLite consensus disorder prediction 246 267 - -
Arst2g01223 445 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01223 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 68 80 IPR008271 GO:0004672|GO:0006468
Arst2g01223 445 SUPERFAMILY Protein kinase-like (PK-like) 3 234 IPR011009 -
Arst2g01223 445 Pfam Protein kinase domain 20 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01223 445 PANTHER CASEIN KINASE-RELATED 12 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01223 Arst-Chr2 16635077 16641744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01223 35 225 MAP Kinase Kinase Kinase AT1G62400 28.426 1.65e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Arst2g01223 Pkinase 1.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01223 K08960 - gmx:100789031 609.757