Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01222 ATGCATTGGACCACAGTCCCACAGTATGTCTCCTCTATCTATCCAGGTGTTAATATACAAACTGGAGAGGAGGTTGCTTGTAAGCTGGAGCCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCGAAATTGTATATGCTTCTCCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGTGTTGAGGGAGACTACAATGTCATGGTTATTGACCTCCTCGGTCCAAGTCTAGAAGATTTGTTTAATTATTGCAACCGTAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTCGAATATATGCATTCAAGAGGTTTTCTTCACCGGGACATAAAGCCAGACAATTTTTTAATGGGCTTAGGCCGCAAAGCAAATCAGGTATACATTATTGACTATGGCCTTGCGAAAAAGTATAGGGATCTTCAAACTCATAGACACATACCATACAGGGAAAACAAGAATCTTACTGGTACAGCACGCTATGCAAGTGTCAACACACATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGGGGAAGTCTTCCCTGGCAGGGACTTAAGGCTGGCAACAAAAAACAAAAATATGATAGAATCAGTGAGAAGAAAGTATCAACTCCCATAGAGGTGCTCTGCAAATCATATCCTGCTGAGTTTGTATCATACTTCCATTACTGCCGTTCTTTGCGGTTTGAAGACAAGCCAGATTATTCATATCTAAAGAGACTTTTCCGTGACCTGTTTATTCGAGAAGGCCATCAATTCGACTATGTTTTTGACTGGACTGTACTGAAGTATCCACATGTTGGCGACAGCAGCTCTAGAGGGCGGAATGGTGCCGGCAAGGCAGCTATGAATGCTGGGCCAACTGCATACAAACCTGAAAAGATCTCAGTTGGAAGAGATAGCCGAGAGCAATACGATGTATACGACCGGAGGAACCAAATGACTAGCCCTCCTGTTGATCACATGAGATACAGAAGTTCTGACGATGTAGCAATACACAGGGATATGCACCATGATGAATATGACGAATACAATACAACTCGTTATGCGAGCACTTCAAGAAGGGCTATAGTCACATCAAATAAGCATGTTTCCTCAGGCGACTATGGTTATGCTGGGATGACTCCGAGTAGGGGCTACGGTGGGATGACCCCAAGTAGAGGCTACGGTAACCCTGGCATGACCCCAAGTAGGGGTCATCCCACCGGTCATGCCGGTAACCCTGGCATGACCCCAAGCAGGGCCTTTCCTGTTCATCCAGGCATGACCCCGAGCAGGGGCCATCCAACCACCACACATCGGATTCAACCTATTTATGAGACCAAACCAGCAACTTTTACTCGCAATGGATCTACAAGACGCCAGCGTGATGAAACTCTAAGGAACTTCGAGCACCTTAATATCAGGAAGTAA 1476 0.4512 MHWTTVPQYVSSIYPGVNIQTGEEVACKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKVSTPIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGHQFDYVFDWTVLKYPHVGDSSSRGRNGAGKAAMNAGPTAYKPEKISVGRDSREQYDVYDRRNQMTSPPVDHMRYRSSDDVAIHRDMHHDEYDEYNTTRYASTSRRAIVTSNKHVSSGDYGYAGMTPSRGYGGMTPSRGYGNPGMTPSRGHPTGHAGNPGMTPSRAFPVHPGMTPSRGHPTTTHRIQPIYETKPATFTRNGSTRRQRDETLRNFEHLNIRK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01222 491 PANTHER CASEIN KINASE-RELATED 11 340 - -
Arst2g01222 491 ProSiteProfiles Protein kinase domain profile. 1 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01222 491 FunFam Casein kinase 1-like protein 8 321 - -
Arst2g01222 491 MobiDBLite consensus disorder prediction 292 313 - -
Arst2g01222 491 FunFam Casein kinase I isoform alpha 17 75 - -
Arst2g01222 491 Gene3D Transferase(Phosphotransferase) domain 1 10 325 - -
Arst2g01222 491 MobiDBLite consensus disorder prediction 408 433 - -
Arst2g01222 491 Pfam Protein kinase domain 11 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01222 491 SUPERFAMILY Protein kinase-like (PK-like) 11 280 IPR011009 -
Arst2g01222 491 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01222 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Arst2g01222 491 CDD STKc_CK1_delta_epsilon 13 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01222 Arst-Chr2 16634845 16641744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01222 81 271 MAP Kinase Kinase Kinase AT1G62400 28.426 1.79e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Arst2g01222 Pkinase 4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01222 K08960 - gmx:100789031 672.159