Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01221 ATGGAGCAATGCATTGGACCACAGTCCCACAGTGTTAATATACAAACTGGAGAGGAGGTTGCTTGTAAGCTGGAGCCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCGAAATTGTATATGCTTCTCCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGTGTTGAGGGAGACTACAATGTCATGGTTATTGACCTCCTCGGTCCAAGTCTAGAAGATTTGTTTAATTATTGCAACCGTAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTCGAATATATGCATTCAAGAGGTTTTCTTCACCGGGACATAAAGCCAGACAATTTTTTAATGGGCTTAGGCCGCAAAGCAAATCAGGTATACATTATTGACTATGGCCTTGCGAAAAAGTATAGGGATCTTCAAACTCATAGACACATACCATACAGGGAAAACAAGAATCTTACTGGTACAGCACGCTATGCAAGTGTCAACACACATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGGGGAAGTCTTCCCTGGCAGGGACTTAAGGCTGGCAACAAAAAACAAAAATATGATAGAATCAGTGAGAAGAAAGTATCAACTCCCATAGAGGTGCTCTGCAAATCATATCCTGCTGAGTTTGTATCATACTTCCATTACTGCCGTTCTTTGCGGTTTGAAGACAAGCCAGATTATTCATATCTAAAGAGACTTTTCCGTGACCTGTTTATTCGAGAAGGCCATCAATTCGACTATGTTTTTGACTGGACTGTACTGAAGTATCCACATGTTGGCGACAGCAGCTCTAGAGGGCGGAATGGTGCCGGCAAGGCAGCTATGAATGCTGGGCCAACTGCATACAAACCTGAAAAGATCTCAGTTGGAAGAGATAGCCGAGAGCAATACGATGTATACGACCGGAGGAACCAAATGACTAGCCCTCCTGTTGATCACATGAGATACAGAAGTTCTGACGATGTAGCAATACACAGGGATATGCACCATGATGAATATGACGAATACAATACAACTCGTTATGCGAGCACTTCAAGAAGGGCTATAGTCACATCAAATAAGCATGTTTCCTCAGGCGACTATGGTTATGCTGGGATGACTCCGAGTAGGGGCTACGGTGGGATGACCCCAAGTAGAGGCTACGGTAACCCTGGCATGACCCCAAGTAGGGGTCATCCCACCGGTCATGCCGGTAACCCTGGCATGACCCCGAGCAGGGGCCATCCAACCACCACACATCGGATTCAACCTATTTATGAGACCAAACCAGCAACTTTTACTCGCAATGGATCTACAAGACGCCAGCGTGATGAAACTCTAAGGAACTTCGAGCACCTTAATATCAGGAAGTAA 1425 0.4484 MEQCIGPQSHSVNIQTGEEVACKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKVSTPIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGHQFDYVFDWTVLKYPHVGDSSSRGRNGAGKAAMNAGPTAYKPEKISVGRDSREQYDVYDRRNQMTSPPVDHMRYRSSDDVAIHRDMHHDEYDEYNTTRYASTSRRAIVTSNKHVSSGDYGYAGMTPSRGYGGMTPSRGYGNPGMTPSRGHPTGHAGNPGMTPSRGHPTTTHRIQPIYETKPATFTRNGSTRRQRDETLRNFEHLNIRK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01221 474 Pfam Protein kinase domain 12 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01221 474 SMART serkin_6 12 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01221 474 Gene3D Transferase(Phosphotransferase) domain 1 6 320 - -
Arst2g01221 474 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01221 474 MobiDBLite consensus disorder prediction 287 308 - -
Arst2g01221 474 PANTHER CASEIN KINASE-RELATED 16 337 - -
Arst2g01221 474 FunFam Casein kinase I isoform alpha 12 70 - -
Arst2g01221 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 109 121 IPR008271 GO:0004672|GO:0006468
Arst2g01221 474 FunFam Casein kinase 1-like protein 3 316 - -
Arst2g01221 474 CDD STKc_CK1_delta_epsilon 13 266 - -
Arst2g01221 474 MobiDBLite consensus disorder prediction 400 437 - -
Arst2g01221 474 SUPERFAMILY Protein kinase-like (PK-like) 12 275 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01221 Arst-Chr2 16634837 16641744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01221 76 266 MAP Kinase Kinase Kinase AT1G62400 28.426 1.31e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Arst2g01221 Pkinase 5.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01221 K08960 - gmx:100789031 672.159