Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01220 ATGGAGCAATGCATTGGACCACAGTCCCACAGTGTTAATATACAAACTGGAGAGGAGGTTGCTTGTAAGCTGGAGCCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCGAAATTGTATATGCTTCTCCAAGGAGGAACGGGGATTCCCCATCTCAAGTGGTTTGGTGTTGAGGGAGACTACAATGTCATGGTTATTGACCTCCTCGGTCCAAGTCTAGAAGATTTGTTTAATTATTGCAACCGTAAGTTCTCATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTCGAATATATGCATTCAAGAGGTTTTCTTCACCGGGACATAAAGCCAGACAATTTTTTAATGGGCTTAGGCCGCAAAGCAAATCAGGTATACATTATTGACTATGGCCTTGCGAAAAAGTATAGGGATCTTCAAACTCATAGACACATACCATACAGGGAAAACAAGAATCTTACTGGTACAGCACGCTATGCAAGTGTCAACACACATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGCTATGTGCTCATGTACTTCTTAAGGGGAAGTCTTCCCTGGCAGGGACTTAAGGCTGGCAACAAAAAACAAAAATATGATAGAATCAGTGAGAAGAAAGTATCAACTCCCATAGAGGTGCTCTGCAAATCATATCCTGCTGAGTTTGTATCATACTTCCATTACTGCCGTTCTTTGCGGTTTGAAGACAAGCCAGATTATTCATATCTAAAGAGACTTTTCCGTGACCTGTTTATTCGAGAAGGCCATCAATTCGACTATGTTTTTGACTGGACTGTACTGAAGTATCCACATGTTGGCGACAGCAGCTCTAGAGGGCGGAATGGTGCCGGCAAGGCAGCTATGAATGCTGGGCCAACTGCATACAAACCTGAAAAGATCTCAGTTGGAAGAGATAGCCGAGAGCAATACGATGTATACGACCGGAGGAACCAAATGACTAGCCCTCCTGTTGATCACATGAGATACAGAAGTTCTGACGATGTAGCAATACACAGGGATATGCACCATGATGAATATGACGAATACAATACAACTCGTTATGCGAGCACTTCAAGAAGGGCTATAGTCACATCAAATAAGCATGTTTCCTCAGGCGACTATGGTTATGCTGGGATGACTCCGAGTAGGGGCTACGGTGGGATGACCCCAAGTAGAGGCTACGGTAACCCTGGCATGACCCCAAGTAGGGGTCATCCCACCGGTCATGCCGGTAACCCTGGCATGACCCCAAGCAGGGCCTTTCCTGTTCATCCAGGCATGACCCCGAGCAGGGGCCATCCAACCACCACACATCGGATTCAACCTATTTATGAGACCAAACCAGCAACTTTTACTCGCAATGGATCTACAAGACGCCAGCGTGATGAAACTCTAAGGAACTTCGAGCACCTTAATATCAGGAAGTAA 1461 0.4517 MEQCIGPQSHSVNIQTGEEVACKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDRISEKKVSTPIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGHQFDYVFDWTVLKYPHVGDSSSRGRNGAGKAAMNAGPTAYKPEKISVGRDSREQYDVYDRRNQMTSPPVDHMRYRSSDDVAIHRDMHHDEYDEYNTTRYASTSRRAIVTSNKHVSSGDYGYAGMTPSRGYGGMTPSRGYGNPGMTPSRGHPTGHAGNPGMTPSRAFPVHPGMTPSRGHPTTTHRIQPIYETKPATFTRNGSTRRQRDETLRNFEHLNIRK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01220 486 Pfam Protein kinase domain 12 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01220 486 SMART serkin_6 12 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01220 486 FunFam Casein kinase I isoform alpha 12 70 - -
Arst2g01220 486 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst2g01220 486 MobiDBLite consensus disorder prediction 403 428 - -
Arst2g01220 486 MobiDBLite consensus disorder prediction 287 308 - -
Arst2g01220 486 PANTHER CASEIN KINASE-RELATED 16 335 - -
Arst2g01220 486 FunFam Casein kinase 1-like protein 3 316 - -
Arst2g01220 486 Gene3D Transferase(Phosphotransferase) domain 1 6 320 - -
Arst2g01220 486 SUPERFAMILY Protein kinase-like (PK-like) 12 275 IPR011009 -
Arst2g01220 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 109 121 IPR008271 GO:0004672|GO:0006468
Arst2g01220 486 CDD STKc_CK1_delta_epsilon 13 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01220 Arst-Chr2 16634837 16641744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01220 76 266 MAP Kinase Kinase Kinase AT1G62400 28.426 1.76e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Arst2g01220 Pkinase 5.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01220 K08960 - gmx:100789031 667.537