Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01214 TCATTTGTCAACAATGTTTGGTATATCAAAATACTTTCACCTGAAGATATTCAAAAGATGGGAGATCAAGGCGTAGAATCTCGCGACAGTGCTCCCGGCCTACCATCAATAGGGGATTACTGA 123 0.4146 MQDSSELMQSAGQVDPQNQTPTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDILLLGDDPWESFVNNVWYIKILSPEDIQKMGDQGVESRDSAPGLPSIGDY 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01214 129 Pfam AUX/IAA family 16 106 IPR033389 -
Arst2g01214 129 SUPERFAMILY CAD & PB1 domains 18 95 - -
Arst2g01214 129 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 14 110 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst2g01214 129 MobiDBLite consensus disorder prediction 109 129 - -
Arst2g01214 129 Gene3D - 17 110 - -
Arst2g01214 129 FunFam Auxin response factor 16 110 - -
Arst2g01214 129 ProSiteProfiles PB1 domain profile. 21 105 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01214 Arst-Chr2 16424715 16425144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01214 1 113 B3 DNA Binding Superfamily AT5G37020 81.579 9.25e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Arst2g01214 AUX_IAA 8.2e-10 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01214 - - adu:127744807 264.233