Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01212 ATGAAGCTTTCAACATCAGGGTTGCCTCAGCAGGGACAACATGAAGGAGGGGAGAAGAAGTGCTTGAATTCTGAGCTATGGCATGCATGTGCGGGTCCATTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTACTTCCCTCAGGGTCATAGTGAGCAGGTTGCTGCCACAACTAACAGAGAAGTTGATGGCCACATACCGAATTACCCGAGCTTGCCTCCCCAGTTGATTTGCCAACTTCACAATGTCACGATGCATGCAGATGTTGAAACAGATGAAGTTTATGCCCAAATGACACTGCAGCCGTTGACTCCGCAAGAGCAGAAGGATACATTTCTTCCCATGGAATTGGGAGTTCCAAGTAAGCAGCCCTCAAATTATTTTTGCAAGACCTTAACTGCTAGTGACACCAGCACACATGGAGGGTTTTCTGTTCCGCGTCGTGCAGCTGAGAAAGTTTTCCCTCCGCTGGATTTCTCATTGCAACCGCCTGCACAAGAACTAATTGCTAGAGATCTCCATGATGTTGAGTGGAAATTTCGTCATATTTTTAGGGGACAGCCAAAGAGGCACCTTCTTACTACCGGCTGGAGTGTATTTGTTAGTGCCAAAAGACTTGTGGCAGGAGATTCTGTGCTTTTCATATGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAATCGACCACAAACTGTAATGCCTTCTTCAGTTCTATCCAGTGATAGTATGCATATTGGGCTTCTTGCAGCAGCTGCCCATGCTGCAGCAACTAATAGCTGTTTCACGGTGTTCTATAATCCAAGGGCTAGTCCATCCGAGTTCGTCATACCACTTTCAAAATATATCAAAGCTGTATACCATACACGTGTTTCTGTTGGTATGCGTTTCAGGATGCTTTTCGAGACCGAAGAATCAAGTGTCCGGAGGTACATGGGTACAATAACTGGAATAAGTGACTTGGATCCAGTTCGTTGGCCAAATTCTCATTGGCGATCTGTAAAGGTTGGTTGGGATGAATCCACAGCAGGAGATAGGCAGCCAAGAGTATCACTATGGGAAATTGAGCCTTTAACAACATTCCCAATGTATCCGTCACTATTTCCGCTCAGATTGAAACGTCCATGGCATCCTGGCACCTCATCTTTTCTTGATGGCAGAGATGACCCAACTAATGGGCTAATGTGGCTTAGAGGTGGACCTGGCGACCAAGGTCTGAATTCAATCAATTTTCAAAGTGTTGGAATGCTGCCATGGATGCAGCAGAGGCTTGATCCGGCTTTGCTTGGAAATGATCATAATCAGCAGTACCAAGCCATGTTGGCAGCTGGTTTGCAGAACATAGGGAGTGGAGAACTCTTGAGGCAACAAATGTTGAATTTCCAACAGCCTTTCAATTATCTTCATCAATCAGGAAATGTCAACACTTCTATCCAGCTTCAGCAGCAGCAGCAAACGATTCAGCAATCAGTGCCTTCTAATATCTTGCAGCCACAAGCACCAGTATTGGGAGAGAACATGACTCAGCAGCAGCTCTTTCAGAAATCGCACAACAACCGAGAAGACCATGCGGAGCAGCACACTTATCAAGATGCACTTCTAGTTCAGGGTGACCAGCTCCACCAAAGGCAACACTCTAGTTTGCCTTCGCCATCGTATTCAAAATCAGAGTTTGTAGATTCAAGCATGAAGTTTGAAGCATCAGGTTCACCAGGACAGAACATGCTTGGTTCACTTTGTCCTGAAGGGAGCAGCAATCTCTTGAATTTATCCAGAGGTGGTCATTCGATACCGACAGAACAGTCACCCCAACAATCATGGCCTGCAAAGTATACACCTATGCAGGTTAATGCTTTTGGCAACTCAATGTCACATGTGCAATATTCTGGAAAAGATATTGCAGTGGCATCACCACATCGTAATTCAGACACTCAGAATCCAACCCTCTTTGGAGTCAATATTGATTCATCCGGTCTTCTACTCCCTGCCACTGTCCCACATTATACGACTTCATCCGCTGATACCGATGCTTCAACAATGCCATTAGGGAATTCTGGATACCAGGGTCCTCTATATGCTTGTATGCAAGATTCATCTGAGTTAATGCAAAGTGCGGGACAAGTTGACCCCCAAAACCAGACACCAACCTTTGTCAAGGTTTGA 2172 0.4567 MKLSTSGLPQQGQHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLDGRDDPTNGLMWLRGGPGDQGLNSINFQSVGMLPWMQQRLDPALLGNDHNQQYQAMLAAGLQNIGSGELLRQQMLNFQQPFNYLHQSGNVNTSIQLQQQQQTIQQSVPSNILQPQAPVLGENMTQQQLFQKSHNNREDHAEQHTYQDALLVQGDQLHQRQHSSLPSPSYSKSEFVDSSMKFEASGSPGQNMLGSLCPEGSSNLLNLSRGGHSIPTEQSPQQSWPAKYTPMQVNAFGNSMSHVQYSGKDIAVASPHRNSDTQNPTLFGVNIDSSGLLLPATVPHYTTSSADTDASTMPLGNSGYQGPLYACMQDSSELMQSAGQVDPQNQTPTFVKV 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01212 723 SUPERFAMILY DNA-binding pseudobarrel domain 113 258 IPR015300 -
Arst2g01212 723 MobiDBLite consensus disorder prediction 567 610 - -
Arst2g01212 723 FunFam Auxin response factor 127 231 - -
Arst2g01212 723 MobiDBLite consensus disorder prediction 543 562 - -
Arst2g01212 723 CDD B3_DNA 128 229 IPR003340 GO:0003677
Arst2g01212 723 SMART B3_2 129 231 IPR003340 GO:0003677
Arst2g01212 723 Gene3D - 127 230 IPR015300 -
Arst2g01212 723 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Arst2g01212 723 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
Arst2g01212 723 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 564 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst2g01212 723 Pfam Auxin response factor 255 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst2g01212 723 FunFam Auxin response factor 293 365 - -
Arst2g01212 723 Gene3D - 293 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01212 Arst-Chr2 16417944 16424096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01212 99 723 B3 DNA Binding Superfamily AT5G37020 65.566 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst2g01212 B3 6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01212 - - adu:107473768 1456.43