Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01210 ATGGCCACTTCCGCCGCCACCGCCACAACTGACGCAGTGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGTGACTTCCAGATGGAATGCTACGTCTTCAAACGCCGAAATGATGTTATTTACATAATTAACCTTGGTAAGACATGGGAGAAGCTCCAACTTGTTGCTAGGATTATTGTTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAATTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAAAGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGATTGTCTGTTTTGGTTATTAGCAAGGATGGCTCTACATATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGGATTACCAGCTGCCCCAAAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCGGTTCCTCAGCAACCCATTGCAGCTGCTCCTACTAACTGGGCCCCAGACGCCGCTGCAGGTTATTGGGAACCAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCCCTGGCTGGGACTAG 930 0.4989 MATSAATATTDAVPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMECYVFKRRNDVIYIINLGKTWEKLQLVARIIVAIENPQDIIVQSARPYGQRIVLKFAQYTGANAIAGRHTPGTFTNQKQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHSIDCLFWLLARMALHMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEGLPAAPKYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPTNWAPDAAAGYWEPVPAPQASVPAPGGVAPPGWD 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01210 309 PANTHER 40S RIBOSOMAL PROTEIN SA 14 295 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01210 309 MobiDBLite consensus disorder prediction 293 309 - -
Arst2g01210 309 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 PRINTS Ribosomal protein S2 signature 103 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 PRINTS Ribosomal protein S2 signature 166 180 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 PRINTS Ribosomal protein S2 signature 24 42 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 PRINTS Ribosomal protein S2 signature 54 63 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 Gene3D - 23 227 - -
Arst2g01210 309 FunFam 40S ribosomal protein SA 23 229 - -
Arst2g01210 309 MobiDBLite consensus disorder prediction 282 309 - -
Arst2g01210 309 Pfam Ribosomal protein S2 126 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 Pfam Ribosomal protein S2 27 124 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 ProSitePatterns Ribosomal protein S2 signature 2. 128 152 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 Hamap 40S ribosomal protein SA [rps-0]. 11 256 IPR027498 GO:0003735|GO:0006412|GO:0015935
Arst2g01210 309 ProSitePatterns Ribosomal protein S2 signature 1. 24 35 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 SUPERFAMILY Ribosomal protein S2 19 209 IPR023591 -
Arst2g01210 309 CDD RPS2 27 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01210 309 NCBIfam 30S ribosomal protein S2 20 215 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01210 Arst-Chr2 16306988 16317630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01210 15 301 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 69.338 5.19e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01210 K02998 - gmx:100786575 452.21