Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01198 ATGTCACAGAAGGAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGCGACTTCCAGATGGAACGCTACGTCTTCAAACGCCGAAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCTATCGAGAACCCACAGGACATCATTGTTCAGTCTGTTAGGCCATATGGTCAGAGAGTTGTCCTTAAGTTTGCACAATACACTGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACGAGCCTCGTCTACTCATTCTGATTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTGGCATTCTTGCCAAAAACAAGGGGAAGCACAATATTGGTTGTCTGTTTTGGATATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATCGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACTAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCTCCGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTTCTCAGCAACCCATTGCAGCTGCTCCTGCTAACTGGGCCCCAGACGCCGCTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGCTGGGACTAG 882 0.4898 MSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSVRPYGQRVVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILIDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGILAKNKGKHNIGCLFWILARMVLQMRGTIRPGLKWDVIVDLFFYREPEEAKQQEEEELLAAPEYAIQDFGAAGIAGFSAADGEWGAVTAEQSWTEPVSQQPIAAAPANWAPDAAAGDWEPVPAPQASVPAPGGVAPTGWD 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01198 293 MobiDBLite consensus disorder prediction 243 293 - -
Arst2g01198 293 PRINTS Ribosomal protein S2 signature 38 47 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 PRINTS Ribosomal protein S2 signature 87 104 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 PRINTS Ribosomal protein S2 signature 150 164 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 PRINTS Ribosomal protein S2 signature 112 129 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 PRINTS Ribosomal protein S2 signature 8 26 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 PRINTS Ribosomal protein S2 signature 129 140 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 Pfam Ribosomal protein S2 11 106 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 ProSitePatterns Ribosomal protein S2 signature 2. 112 136 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 FunFam 40S ribosomal protein SA 7 213 - -
Arst2g01198 293 NCBIfam 30S ribosomal protein S2 4 199 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01198 293 PANTHER 40S RIBOSOMAL PROTEIN SA 1 281 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01198 293 SUPERFAMILY Ribosomal protein S2 3 193 IPR023591 -
Arst2g01198 293 CDD RPS2 11 177 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 Hamap 40S ribosomal protein SA [rps-0]. 2 240 IPR027498 GO:0003735|GO:0006412|GO:0015935
Arst2g01198 293 ProSitePatterns Ribosomal protein S2 signature 1. 8 19 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01198 293 Gene3D - 7 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01198 Arst-Chr2 16198498 16200630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01198 1 285 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 70.175 2.99e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01198 K02998 - gmx:100786575 426.017