Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01187 ATGGTCACTTCTGCCGCCGCCACAACTGCCACAGCGCCACGCCAGCTGTCACAGAAGGAGCAGGACATCCAGATGCTTGCTGCTGAGGTCCACCTCGGAACCAAAAATTGTGACTTCCAGATGGAACGCTACATCTTCAAACGCCGAAATGATGATATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGAATTATTGTTGCTATCGAGAACCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGCTGTCCTTAAGTTTGAACAATACACTAGTGCGAATGCAATTGTTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAAACATCCTATAACAAGCCTCGTCTACTCATTCTGATTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAAGGGTACTATTTGTCTGGGGCTTAACTGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGTATTACCAGCTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCCGCAGCTGATGGGGAATGGGAGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAGCAACCCATTGCAGCTGCTCATGCTAACTGGGCCCCAGACGCCGCTACAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCATCCGTTCCTGCACCTGGAGGTGTTGCTCCCACTGGCTGGGACTAG 924 0.4913 MVTSAAATTATAPRQLSQKEQDIQMLAAEVHLGTKNCDFQMERYIFKRRNDDIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFEQYTSANAIVGRHTPGTFTNQMQTSYNKPRLLILIDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMKGTICLGLNWDVMVDLFFYREPEEAKQQEEEVLPAAPEYAIQDFGAAGIAGFPAADGEWEAVTAEQSWTEPVPQQPIAAAHANWAPDAATGDWEPVPAPQASVPAPGGVAPTGWD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01187 307 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 FunFam 40S ribosomal protein SA 22 227 - -
Arst2g01187 307 MobiDBLite consensus disorder prediction 279 307 - -
Arst2g01187 307 NCBIfam 30S ribosomal protein S2 23 213 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01187 307 Pfam Ribosomal protein S2 120 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 SUPERFAMILY Ribosomal protein S2 24 207 IPR023591 -
Arst2g01187 307 PANTHER 40S RIBOSOMAL PROTEIN SA 11 295 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01187 307 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01187 307 Gene3D - 23 225 - -
Arst2g01187 307 Hamap 40S ribosomal protein SA [rps-0]. 10 254 IPR027498 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01187 Arst-Chr2 16075094 16077187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01187 5 299 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 68.243 1.44e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01187 K02998 - gmx:100786575 443.736