Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01182 ATGGTCACTTCCGCCGCCGCCACAACTGCCGCAGCACCATGCCAGCTGTCACAGAAGAAGCAGGACATCCAGATGATGCTTGCTGCTGAGGTCCACCTCAGAACCAAAAATTGCGACTTCCAGATGGAACGCTACGTCTTCAAATACCGAAATGGTGGTATTTACATAATTAACATTGGCAAGACATGGGCGAAGCTCCAACTTGCTGATAGGATTATTATTGCTATCGAGAACCCACAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGAGATGTCCTTAAGTTTGCACAATACACTGGTGCAAATGCAATCGCTGGAAGGCACACTCCTGGAACATTCACTAATGAAATGCAAACATCCTATAACGAGCCCCGTCTACGCATTCTGACTGATCCAAAGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCGACCATTGCCTTCTGTGACACCGATTCTCCGATGCGCTATGTTGATGTTTGCATTCCTACTAATAACAAGGAGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCATGGATGGTTCTGCAGATGAGGGGTACTATTTGTCCAGGGCTTAAGCGGGACGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGGATTACCAGCTGCCCCAAAATATGCCATTTAA 705 0.4624 MVTSAAATTAAAPCQLSQKKQDIQMMLAAEVHLRTKNCDFQMERYVFKYRNGGIYIINIGKTWAKLQLADRIIIAIENPQDIIVQSARPYGQRDVLKFAQYTGANAIAGRHTPGTFTNEMQTSYNEPRLRILTDPKTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVCIPTNNKEKHSIGCLFWLLAWMVLQMRGTICPGLKRDVMVDLFFYREPEEAKQQEEEGLPAAPKYAI 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01182 234 FunFam 40S ribosomal protein SA 22 228 - -
Arst2g01182 234 Pfam Ribosomal protein S2 26 121 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01182 234 Pfam Ribosomal protein S2 122 187 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01182 234 PANTHER 40S RIBOSOMAL PROTEIN SA 13 232 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01182 234 CDD RPS2 26 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01182 234 Hamap 40S ribosomal protein SA [rps-0]. 10 229 IPR027498 GO:0003735|GO:0006412|GO:0015935
Arst2g01182 234 SUPERFAMILY Ribosomal protein S2 19 208 IPR023591 -
Arst2g01182 234 NCBIfam 30S ribosomal protein S2 19 214 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01182 234 Gene3D - 22 226 - -
Arst2g01182 234 PRINTS Ribosomal protein S2 signature 53 62 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01182 234 PRINTS Ribosomal protein S2 signature 102 119 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01182 234 PRINTS Ribosomal protein S2 signature 165 179 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01182 234 PRINTS Ribosomal protein S2 signature 23 41 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01182 234 PRINTS Ribosomal protein S2 signature 127 144 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01182 234 PRINTS Ribosomal protein S2 signature 144 155 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01182 Arst-Chr2 16021901 16023632 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01182 1 234 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 73.967 1.69e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01182 K02998 - adu:107472092 459.914