Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01181 ATGGCCACTTCCGCCGCCACAACCGCTGAAGTGTCGCACCAGCTCTCGCGGAAGGAGCAAGACATCCAAATGATGCTCGTAGCTGAGGTTCATCTCGGAACCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATCGAGAACCCTCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTACCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACAAGCCTCGCCTACTCATTCTTACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGAAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTAGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAATTGCCCCAGAATATGCCATTCAAGATTTTGGTGCTGCTGGCATTGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTTCTCAACAACCCATTGCAGCTGCACCTGCTAACTGGGCCCCAGACGCCGCTGCAGGTGATTGGGAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCACCTGGAGGTGTTGCCCCCACTGGTTGGGAATAA 924 0.4968 MATSAATTAEVSHQLSRKEQDIQMMLVAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFTQYTGANAIAGRHTPGTFTNQMQTSYNKPRLLILTDPRTDHQPIKEGALENIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEELPIAPEYAIQDFGAAGIAGFPAADGEWGAVTAEQSWTEPVSQQPIAAAPANWAPDAAAGDWEPVPAPQASVPAPGGVAPTGWE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01181 307 SUPERFAMILY Ribosomal protein S2 18 207 IPR023591 -
Arst2g01181 307 NCBIfam 30S ribosomal protein S2 18 213 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01181 307 MobiDBLite consensus disorder prediction 279 307 - -
Arst2g01181 307 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 Gene3D - 21 225 - -
Arst2g01181 307 Hamap 40S ribosomal protein SA [rps-0]. 9 254 IPR027498 GO:0003735|GO:0006412|GO:0015935
Arst2g01181 307 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 Pfam Ribosomal protein S2 120 189 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 PANTHER 40S RIBOSOMAL PROTEIN SA 12 295 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01181 307 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01181 307 FunFam 40S ribosomal protein SA 21 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01181 Arst-Chr2 15987440 15990000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01181 1 299 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 69.900 4.30e-146 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01181 K02998 - gmx:100786575 451.825