Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01174 ATGGCCACTTCCGCCGCTGCGCCGCGCCAGCTCTCTCAGAAGGAGCAAGACATCCAGATGATGCTTGCGGCTGAGGTGCATTTGGGAACCAAAAACTGCGACTTCCAGATGGAACGCTATGTCTTCAAACGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTTGCCATCGAGAATCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAATTTGCCCAATACACCGGTGCAAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTTCTTATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACAATTGCCTTTTGCGATACTGATTCTCCAATGCGGTATGTTGATGTTGGCATTCCTCCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAAGCACCAGCTGCCCCAGAATATGCCATTCAAGACTTTGGTGCTGCTGGCATTGCCGGTTTCCCCACAGCTGATGGTGAATGGACGGCTGTCACAGTACAACCCTGGCCCGAGGCAGTTCCACAACAACCTATTGCAGCTGCGCCTGCTGATTGGGCCCCAGATACTTCTGCAGCTGCAGGTGATTGGGAACCGGTTCCAGCTCCTCAGCCTTCCGTTCCGGCACCCGGAGCTGTTGCTCCCACTAGTTGGGAATAG 783 0.5147 MATSAAAPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPPEEAKQQEEEEAPAAPEYAIQDFGAAGIAGFPTADGEWTAVTVQPWPEAVPQQPIAAAPADWAPDTSAAAGDWEPVPAPQPSVPAPGAVAPTSWE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01174 260 Pfam Ribosomal protein S2 21 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01174 260 PRINTS Ribosomal protein S2 signature 97 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01174 260 PRINTS Ribosomal protein S2 signature 139 150 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01174 260 PRINTS Ribosomal protein S2 signature 122 139 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01174 260 PRINTS Ribosomal protein S2 signature 18 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01174 260 PRINTS Ribosomal protein S2 signature 48 57 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01174 260 NCBIfam 30S ribosomal protein S2 14 167 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01174 260 PANTHER 40S RIBOSOMAL PROTEIN SA 6 165 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01174 260 SUPERFAMILY Ribosomal protein S2 13 165 IPR023591 -
Arst2g01174 260 ProSitePatterns Ribosomal protein S2 signature 2. 122 146 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01174 260 Gene3D - 17 173 - -
Arst2g01174 260 ProSitePatterns Ribosomal protein S2 signature 1. 18 29 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01174 260 MobiDBLite consensus disorder prediction 220 260 - -
Arst2g01174 260 FunFam 30S ribosomal protein S2 17 173 - -
Arst2g01174 260 CDD RPS2 21 165 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01174 Arst-Chr2 15923940 15926224 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01174 5 252 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 58.503 2.49e-109 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01174 K02998 - gmx:100786575 356.295