Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01170 ATGGCCACTTCCGCCGCTGCGCCGCGCCAGCTCTCTCAGAAGGAGCAAGACATCCAGATGATGCTTGCGGCTGAGGTGCATTTGGGAACCAAAAACTGCGACTTCCAGATGGAACGCTATGTCTTCAAACGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTCGCCATCGAGAATCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAATTTGCCCAATACACCGGTGCAAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTTCTTATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACAATTGCCTTTTGCGATACTGATTCTCCAATGCGGTATGTTGATGTTGGCATTCCTACCTATTGCAGCTGCGCCTGCTGATTGGGCCCCAGATACTTCTGCAGCTGCAGGTGATTGGGAACCGGTTCCAGCTCCTCAGCCTTCCGTTCCGGCACCCGGAGCTGTTGCTCCCACTGGTTGGGAATAG 625 0.5056 MATSAAAPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKHSIGCLFWLLARMVLQMRGIIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAAPEYAIQDFAIQDFGAAGIAGFPTADGEWTAVTVQPWPEEVPQQPIAAAPADWAPDTSAAAGDWEPVPAPQPSVPAPGAVAPTGWE 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01170 309 PANTHER 40S RIBOSOMAL PROTEIN SA 6 297 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01170 309 Pfam Ribosomal protein S2 21 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 NCBIfam 30S ribosomal protein S2 14 209 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01170 309 SUPERFAMILY Ribosomal protein S2 13 203 IPR023591 -
Arst2g01170 309 Hamap 40S ribosomal protein SA [rps-0]. 5 255 IPR027498 GO:0003735|GO:0006412|GO:0015935
Arst2g01170 309 ProSitePatterns Ribosomal protein S2 signature 2. 122 146 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 ProSitePatterns Ribosomal protein S2 signature 1. 18 29 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 FunFam 40S ribosomal protein SA 17 223 - -
Arst2g01170 309 CDD RPS2 21 187 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 MobiDBLite consensus disorder prediction 266 309 - -
Arst2g01170 309 Gene3D - 17 223 - -
Arst2g01170 309 PRINTS Ribosomal protein S2 signature 18 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 PRINTS Ribosomal protein S2 signature 48 57 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 PRINTS Ribosomal protein S2 signature 139 150 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 PRINTS Ribosomal protein S2 signature 97 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 PRINTS Ribosomal protein S2 signature 122 139 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01170 309 PRINTS Ribosomal protein S2 signature 160 174 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01170 Arst-Chr2 15826226 15828572 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01170 5 301 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 70.903 8.69e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01170 K02998 - gmx:100786575 457.218