Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01163 ATGGCCACTTCCGCCGCCACAACCGCTGAAGTGTCGCACCAGCTCTCGCGGAAGGAGCAAGACATCCAAATGATGCTCGTAGCTGAGGTTCATCTCGAAAGCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCTGCAATGATTGTATTTACATAATTAACCTTGGCAAGACATGGGAGAACCTCCAACTTGCTACTAGGATTATTGTTGCCATCGAGAACCCTCACGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTGACTGATCCAATGACTGATCATCAGATGAGGGGTACTATTCGTCCGGGGCTTAAGTGGGACGTGATGCGCATTAAGGAAGGTGCTCTTGGAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGCTTGTTTTGGTTATTAGCAAGGATGGTTCTGCAGATGAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGAACAATCTTTCTTGCAGTACATACAGGTGTAAAAAATTTGGAGAATCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAACTGCCCCAGTATATGCCATTCAAGATTTTGGTGCTACTGGCATGGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAACAACCCATTGCAGCTGCACCTGCTAACTTGGCCCCAGACGCCGCTGCAGGTGATTGGAAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCATCCATAGGTGTTGCCCCCACTGGCTGGGAATAA 987 0.4934 MATSAATTAEVSHQLSRKEQDIQMMLVAEVHLESKNCDFQMERYVFKRCNDCIYIINLGKTWENLQLATRIIVAIENPHDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPMTDHQMRGTIRPGLKWDVMRIKEGALGNIPTIAFCDTDSPMRYVDVTIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMNNLSCSTYRCKKFGESEEAKQQEEEELPTAPVYAIQDFGATGMAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANLAPDAAAGDWKPVPAPQASVPASIGVAPTGWE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01163 328 MobiDBLite consensus disorder prediction 296 328 - -
Arst2g01163 328 Pfam Ribosomal protein S2 153 203 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01163 328 Pfam Ribosomal protein S2 26 124 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01163 328 CDD RPS2 25 205 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01163 328 NCBIfam 30S ribosomal protein S2 18 221 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01163 328 SUPERFAMILY Ribosomal protein S2 18 220 IPR023591 -
Arst2g01163 328 FunFam 40S ribosomal protein SA 21 248 - -
Arst2g01163 328 Hamap 40S ribosomal protein SA [rps-0]. 9 275 IPR027498 GO:0003735|GO:0006412|GO:0015935
Arst2g01163 328 PRINTS Ribosomal protein S2 signature 178 192 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01163 328 PRINTS Ribosomal protein S2 signature 157 168 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01163 328 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01163 328 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01163 328 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01163 328 PANTHER 40S RIBOSOMAL PROTEIN SA 12 316 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01163 328 Gene3D - 21 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01163 Arst-Chr2 15634385 15637149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01163 1 328 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 62.500 3.30e-125 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01163 K02998 - gmx:100818292 416.001