Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst2g01162 ATGGCCACTTCCGCCGCCACAACCGCTGCAGTGTCGCACCAGCTCTCGCAGAAGGAGCAAGACATCCAAATGATGCTCGCAGCTGAGGTTCATCTCGGAACCAAAAACTGCGACTTCCAGATGGAACGCTACGTTTTCAAGCGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAACCTCCAACTTGCTACTAGGATTATTGTTGCCATCGAGAACCCTCACGACATCATTGTTCAGTCTGCTAGGCCATATGGTAAGAGGACAGTCTTGAAGTTTGCCCAATACACGGGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGAAAATATTCCAACGATTGCCTTCTGCGACACTGATTCTCCGATGCGCTATGTTGATGTTACCATTCCTGCCAATAACAAGGGGAAGCACTGTATTGGTTGTCTGTTTTTGTTATTAGCAAGGATGGTTCTGCAGATAAGGGGTACTATTCGTCCAGGGCTTAAGTGGGATGTGATGGTGGATTTATTCTTCTATAGAGAACCTGAAGAGGCCAAGCAACAAGAGGAGGAGGAATTACCAGCTGCCCCAGTATATGCCATTCAAGATTTTGGTGCTACTGGCATTGCCGGCTTCCCTGCAGCTGATGGGGAATGGGGGGCTGTTACAGCTGAACAATCCTGGACTGAACCAGTTCCTCAACAACCCATTGCAGCTGCACCTGCTAACTTGGCCCCAGACGCCGCTGCAGGTGATTGGAAGCCAGTTCCAGCTCCACAGGCTTCCGTTCCTGCATCCATAGGTGTTGCCCCCACTGGCTGGGAATAA 924 0.4957 MATSAATTAAVSHQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWENLQLATRIIVAIENPHDIIVQSARPYGKRTVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALENIPTIAFCDTDSPMRYVDVTIPANNKGKHCIGCLFLLLARMVLQIRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEELPAAPVYAIQDFGATGIAGFPAADGEWGAVTAEQSWTEPVPQQPIAAAPANLAPDAAAGDWKPVPAPQASVPASIGVAPTGWE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst2g01162 307 PRINTS Ribosomal protein S2 signature 52 61 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 PRINTS Ribosomal protein S2 signature 164 178 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 PRINTS Ribosomal protein S2 signature 22 40 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 PRINTS Ribosomal protein S2 signature 143 154 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 PRINTS Ribosomal protein S2 signature 126 143 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 PRINTS Ribosomal protein S2 signature 101 118 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 NCBIfam 30S ribosomal protein S2 18 213 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01162 307 PANTHER 40S RIBOSOMAL PROTEIN SA 12 295 IPR005707 GO:0003735|GO:0006412|GO:0015935
Arst2g01162 307 SUPERFAMILY Ribosomal protein S2 17 207 IPR023591 -
Arst2g01162 307 ProSitePatterns Ribosomal protein S2 signature 1. 22 33 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 Hamap 40S ribosomal protein SA [rps-0]. 9 254 IPR027498 GO:0003735|GO:0006412|GO:0015935
Arst2g01162 307 ProSitePatterns Ribosomal protein S2 signature 2. 126 150 IPR018130 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 CDD RPS2 25 191 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 Gene3D - 21 226 - -
Arst2g01162 307 FunFam 40S ribosomal protein SA 21 227 - -
Arst2g01162 307 Pfam Ribosomal protein S2 25 120 IPR001865 GO:0003735|GO:0005840|GO:0006412
Arst2g01162 307 MobiDBLite consensus disorder prediction 280 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst2g01162 Arst-Chr2 15630686 15633940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst2g01162 1 307 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 68.404 7.72e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst2g01162 K02998 - gmx:100818292 456.062